Streptomyces caniscabiei: IHE65_36645
Help
Entry
IHE65_36645 CDS
T08931
Name
(GenBank) helix-turn-helix domain containing protein
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
scae
Streptomyces caniscabiei
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scae03000
]
IHE65_36645
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
scae01504
]
IHE65_36645
Transcription factors [BR:
scae03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
IHE65_36645
Antimicrobial resistance genes [BR:
scae01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
IHE65_36645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_24
Xre-like-HTH
HTH_24
TetR_C_11
HTH_31
LacI
HTH_IclR
TetR_C_43
DUF6471
HTH_20
HTH_10
TrmB
MerR
AbiEi_4
Phage_CII
HTH_26
COR
Motif
Other DBs
NCBI-ProteinID:
WEO28257
LinkDB
All DBs
Position
8272861..8273481
Genome browser
AA seq
206 aa
AA seq
DB search
MAVDREHVLRSAAALLTRKSTATMDEVAKAAGISRATLHRHFAGRDALVRALEALGIAEC
EAALDAARPDEGPARDAVRRLVREIEPAAGLLAFLYTENQLFEGEGQHEGWARIDERIAT
LFKRGQAAGEFRIDLTPAWLTEALYGLLASGAWAVSEGRVAAKDFTFMIAELLLGGALRH
PEHPRDPAHPRDPAHPRHPEHQREES
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgatcgtgaacacgtgctgcgcagcgcagccgccctgctgacccgcaagtcc
accgcgaccatggacgaggtcgccaaggccgccgggatcagccgggccacgctgcaccgc
cacttcgcaggacgcgacgcgctcgtacgggcgctggaggcactcggcatcgcggagtgc
gaggccgcactggacgcggcccgtcctgacgagggtccggcgcgcgacgccgtccgtcgg
ctggtgcgcgagatcgaacccgccgcgggcctgctcgccttcctctacaccgagaaccag
ctgttcgagggggaagggcagcacgagggctgggcccggatcgacgagcgcatcgcgacc
ctcttcaaacgcggccaggcggccggtgagttccgcatcgacctcacacctgcctggctc
accgaggcgctctacggcctgctggcctccggcgcctgggccgtctccgaaggccgtgtg
gccgccaaggacttcaccttcatgatcgccgagctactgctcggcggcgccctgcgccac
cccgaacacccccgcgaccccgcacacccccgcgaccccgcacacccgcgtcaccccgaa
caccagagagaggaatcatga
DBGET
integrated database retrieval system
