Streptomyces caniscabiei: IHE65_38080
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Entry
IHE65_38080 CDS
T08931
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
scae
Streptomyces caniscabiei
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scae03400
]
IHE65_38080
DNA repair and recombination proteins [BR:
scae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IHE65_38080
Archaeal homologous recombinant proteins
IHE65_38080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Metallophos_3
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
WEO28518
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All DBs
Position
8585952..8587115
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AA seq
387 aa
AA seq
DB search
MRILHTSDWHLGRTFHRVNMLGAQAEFIGRLVATVRERDVDAVVVAGDVYDRAVPPLAAV
ELFDDALHRLAELDVPTVMISGNHDSARRLGVAAGLIGRAGIHLRTSAAAAGTPVTLSDT
HGDVAFYGLPYLEPALVKDEFGVEKAGHEAVLAAAMDRVRTDLAGRPAGTRSVVLAHAFV
TGGAPSDSERDISVGGVSAVPAGVFDGVDYVALGHLHGSQTLTDRVRYSGSPLPYSFSEA
DHRKSMWLVDLGADGSIEAERIDCPVPRPLARIRGRLDDLLADPDLDRHEEAWVEATLTD
PVRPAEPMARLCARFPHTLSLVFDPERAPGDPDVSYARRLAGRDDQEIAEDFVAHVRGAG
PDEHERTVLRDAFDAVRADETVREVAR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
ttgagaattctgcacacctccgactggcatctcggtcggacgttccaccgggtgaacatg
ctgggcgcgcaggccgagttcatcggtcggctggtcgcgacggtgcgggaacgcgacgtc
gacgcggtggtcgtggcgggggacgtgtacgaccgggcggtgccgccgctggccgcggtc
gagctcttcgacgacgccctgcaccggctggccgagctggacgtgcccacggtgatgatc
tccgggaaccacgattcggcgcgccgcctcggtgtcgcggcgggcctcatcggccgggcc
ggtatccatctgcggacgtcggccgcggcggccggcaccccggtgacgctgtcggacacc
cacggcgacgtcgccttctacgggctgccctacctcgaacccgccctcgtgaaggatgag
ttcggcgtcgagaaggcaggccacgaagcggtgctcgccgccgccatggaccgcgtccgg
accgacctggccggccggccggcgggcacccgttccgtcgtcctggcccatgccttcgtc
accggcggcgcccccagcgacagcgagcgggacatctccgtcggcggcgtctccgccgtg
cccgccggtgtcttcgacggcgtcgactacgtggcgctgggccatctgcacggcagccag
accctcaccgaccgggtgcgctactccggttccccgctcccgtactccttctccgaggcc
gaccaccgcaagagcatgtggctggtggacctcggcgccgacggatctatcgaggccgag
cggatcgactgcccggtcccgcgccccctcgcccggatccgcgggcggctggacgacctg
ctcgccgaccccgacctggaccggcacgaggaggcatgggtcgaggccaccctcaccgac
cccgtccggcccgccgagcccatggcccggctgtgcgcgcgcttcccgcacacgctcagc
ctcgtcttcgaccccgaacgggcccccggcgaccccgacgtctcctacgcccggcgcctc
gcaggccgggacgaccaggagatcgccgaggacttcgtggcccatgtccgcggcgccggc
cccgacgagcacgaacggaccgtgctcagggacgcgttcgacgccgtacgggccgacgag
accgtccgggaggtcgccagatga
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