Sellimonas caecigallum: ACI3DM_01720
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Entry
ACI3DM_01720 CDS
T10803
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scag Sellimonas caecigallum
Pathway
scag03420
Nucleotide excision repair
scag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACI3DM_01720 (pcrA)
03430 Mismatch repair
ACI3DM_01720 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scag03400
]
ACI3DM_01720 (pcrA)
Enzymes [BR:
scag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACI3DM_01720 (pcrA)
DNA repair and recombination proteins [BR:
scag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACI3DM_01720 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
ACI3DM_01720 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DUF5397
Motif
Other DBs
NCBI-ProteinID:
XKQ21634
LinkDB
All DBs
Position
complement(363332..365578)
Genome browser
AA seq
748 aa
AA seq
DB search
MSIYDSLNEKQKEAVLHTEGPLLILAGAGSGKTRVLTHRIAYLIEEKGINPWNILAITFT
NKAAGEMRERVDKIVGFGSESIWVSTFHSACVRILRRFIDRLGYDTSFTIYDADDQKSLM
KDVCRYLQVDTKIYKERSLLAAISAAKDELITPKEYLLNAGGDFGKKKIAEVYEEYEKQL
RANNALDFDDLLLRTVQLFQTQPDVLDYYQERFRYIMVDEYQDTNTAQFELIRLLSSKYR
NLCVVGDDDQSIYKFRGANIKNILSFEDVFQDAKVIKLEQNYRSTGNILDAANAVISHNV
GRKEKKLWTEKDAGEKITFRQFDTAYDEADYIVSTIKGKTQSQNASYNQFAVLYRTNAQS
RLFEERFVTANIPYKIIGGVNFYARREIKDLLAYLRTIENGRDDLAVRRIINVPKRGIGQ
TSINRVQEYAAEKEISFYEALLAADLIPGIGRSLPKLESFAALIEHFRAEAGTMDLLELL
NEIIDTIEYEDYLRDIDGEDAESRIENVDELRNKMAAYIESCEETDEKPTLGGFLEEVAL
VADIDNLDETSDYVVLMTLHSAKGLEFPYVFLAGMEDGLFPSYMTITADDPMELEEERRL
CYVGITRAMDDLTLTSARRRMVHGTTQYNNLSRFLKEIPITLLNTGTGRLEEKKNMDIPK
NDVYAKAKEAFRTQAFGGVTKPVQQFKVAGQKGPGYDVGDRVRHMKFGEGLVTSITEGGR
DYEVTVDFDQVGTKRMFAGFAKLQKIEE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttacgattcattgaatgagaaacaaaaagaggcggtcttgcatacagagggg
ccgcttttgatcctcgcaggtgcaggatccgggaagacaagagtcctgacacaccggatc
gcttacctgatagaagaaaaaggaatcaatccgtggaatatcctggctatcacatttacg
aacaaagcagcaggggaaatgagagaacgtgtggacaaaatcgtagggtttggttcggaa
agtatatgggtcagcacgttccattctgcgtgtgtacgtattctcaggagatttatcgac
cgtctgggatacgataccagctttactatttatgacgcagacgaccagaaatcgctgatg
aaagatgtgtgcagatatctccaggtggacacaaaaatttataaagaaagaagtctcctg
gcagctatctctgcggcaaaggatgaattgatcacaccaaaggaatatctcctgaatgca
gggggagactttggaaaaaagaagattgcagaagtgtacgaagaatatgaaaagcagctc
agggcaaacaatgcactggattttgacgatcttcttctgcgcacagtccagctcttccag
acacagccggatgtgctggattattaccaggagcgttttcgctatatcatggtagacgag
tatcaggatacgaacacggcgcagtttgaactgatccgtcttctctcctcaaaatacagg
aacctctgtgtggtgggtgacgacgatcagtccatctacaaattccgcggggcaaacatc
aagaatatcctgagttttgaggacgtattccaggatgcaaaagtcatcaagctggaacaa
aattaccgttctaccggaaatatcctggatgcggcaaatgcggtcatcagccacaacgta
gggcgaaaagagaaaaaactgtggacggagaaagacgcgggagaaaagatcacgttccgt
cagtttgacacagcgtacgacgaggcagactatattgtaagcacgatcaaggggaagaca
cagtcccagaacgcttcatacaatcagtttgctgttttgtaccggactaatgcacaatcc
cgtctttttgaagaacggttcgtgacggcaaacattccttacaaaatcatcggaggcgtg
aatttttatgcaaggcgggaaatcaaagaccttcttgcctatctgaggactatcgaaaat
ggaagagatgatttggcagtgcgccgtatcatcaacgtgcccaaaagagggatcggacag
acatccatcaaccgggtgcaggaatatgcggctgaaaaagaaatcagtttttacgaagca
ctcctggcggcagatctgattcctggtatcgggcgaagcctcccgaagctggaatcattc
gccgctttgatcgaacacttccgggcagaggcaggaacgatggatcttttggagcttctc
aatgagatcatcgatacgatcgagtatgaagactatttgcgggatatcgatggcgaagac
gcggagagccggatcgaaaacgtggacgaactgcgaaataaaatggccgcctatattgaa
agctgtgaagagacagacgaaaagccgacgcttggaggttttctggaagaagttgctctc
gtggcagatattgacaacctggatgagacaagcgattatgtcgtgctgatgacacttcac
agcgcaaagggactggagttcccatacgtctttctggcaggtatggaggacgggcttttc
ccgagctatatgacgatcacagccgatgatccgatggagctggaagaagagcgcagactt
tgctacgttggaatcacgagggctatggatgacttgacactcacaagtgcaagacgcagg
atggttcacggaacgacacagtacaacaatctgtcccgattcctgaaagaaatcccgatc
acgcttttaaacaccggcaccggacgtctcgaagagaagaaaaacatggatattccgaaa
aatgacgtctacgcgaaggcaaaagaggcatttcggacacaagcgtttggaggagtcaca
aagccggtacagcagtttaaagttgcaggtcaaaagggtccgggctatgacgtgggagac
cgagtgcgccatatgaaattcggagaagggcttgtcacttccattacagaaggcggacga
gactacgaagtgacggttgattttgatcaggtaggaacgaaacgaatgtttgcaggattt
gcaaaacttcagaaaatagaagaataa
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integrated database retrieval system
