Sellimonas caecigallum: ACI3DM_02385
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Entry
ACI3DM_02385 CDS
T10803
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
scag Sellimonas caecigallum
Pathway
scag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACI3DM_02385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scag03400
]
ACI3DM_02385
Enzymes [BR:
scag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACI3DM_02385
DNA repair and recombination proteins [BR:
scag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACI3DM_02385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
AAA_11
HHH_5
Viral_helicase1
PIF1
nSTAND3
Helicase_RecD
T2SSE
UvrD-helicase
AAA_22
AAA_28
NPHP3_N
RsgA_GTPase
AAA
MeaB
HHH_2
SRP54
AAA_16
HHH_3
NTPase_1
TrwB_AAD_bind
AAA_29
SLFN-g3_helicase
TsaE
ABC_tran
TRI-like_N
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
XKQ21757
LinkDB
All DBs
Position
complement(507125..509335)
Genome browser
AA seq
736 aa
AA seq
DB search
MEKITGYVDHIVFRNEDNGYTVFQLNNEDGELTCVGKFAYIGDGEFLELSGEYVTHPTYG
VQLKVEEHRIKEPEDLEAVERYLGSGAIKGIGPALAGKIVAKFRKDTFRIIEEEPERLAE
IKGISEKKAREIAEQVEEKKDLRQAMIYLQKYGISLTLAVKIYQKYGTRIYHILEENPYR
LADDIEGIGFKTADEIAARIGIHTDSDFRIKSGIFYTLLQSLAEGHIFLYEDVLLKKTSE
LLGVQIEDIEKYLMDLAMERKIVMKKNEESVRIYPAKYYYMELNTAKMLHDLDIDYEEDD
DMILRRLEKLEEYGELRLDEKQREAVKEAVKSGVFVLTGGPGTGKTTTINAMIRYFESEG
MDIRLAAPTGRAAKRMTEATGYEAQTIHRLLEVSGNPEEGKTGGFGRNRENPLETDAVII
DEMSMVDLPLMHALLSAIVPGTRLILVGDINQLPSVGPGKVLKDIIDSKVFRVVMLTKIF
RQAQESDIVMNAHKINAGQEVVLDNKSKDFFFLKRQDANVIISVVLTLIQKKLPKYVDAR
MSDIQVLTPMKKGLLGVERLNRILQQYLNPPSDKKAEKEYGEKLFRVGDKVMQVKNNYQL
EWEIATKYGLVVDKGIGVFNGDMGIITKINTYDETLEVEYDEKRKVTYPFKMLDELELAY
AVTIHKSQGSEYPAVIIPLLAGPRQLYCRNLLYTAVTRARKCVTLVGSDTVFQEMIQNVE
EQKRNTSLAEHIAEFL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaataacaggatatgtggatcacattgtctttaggaacgaagacaacggctac
acggtgtttcagctgaataatgaagatggagagttaacgtgtgtcggcaaatttgcatat
attggagatggggagtttctggaactttccggagaatatgtcacacatccgacctacgga
gttcagcttaaagtagaagaacatcggatcaaagaaccggaggatttggaagcagttgag
cgatatcttggctccggcgcaataaaggggatcggaccggctctggcaggaaagatcgtg
gcaaaattcaggaaggacacgtttcgcatcattgaggaagaaccggaacgcctggcagag
atcaaggggatcagtgagaaaaaagctcgggagatagcagagcaggtggaggaaaaaaaa
gatctgcgacaggcgatgatctacctgcagaaatacggcatcagtctgacacttgccgtg
aagatctatcagaaatacgggacaaggatttatcatattttggaggaaaatccttatcga
ctggcagatgatatcgaaggaattggctttaagacagcggatgagatcgcagcgaggata
ggcatacacactgattcggattttcggattaagagcggcattttctatacgcttttgcaa
agtcttgcggaaggccatatttttttgtacgaagatgtgctgttgaaaaaaacgtcggaa
cttctgggagtgcagatcgaagatattgaaaagtatctgatggatttggcgatggaaaga
aaaattgtaatgaaaaagaacgaagaatctgtcagaatttatccggcaaaatactactat
atggaactaaatacggcaaaaatgcttcatgatctggatatcgattacgaggaagacgac
gatatgatccttcgaagactggaaaaactggaagagtacggagagcttagactggacgaa
aagcagagggaggcagtgaaagaggcagtaaaaagcggagtgtttgtcctgacaggcggg
ccgggaaccgggaagacaacaacgataaatgccatgatacgatatttcgaaagtgaaggg
atggatatccgtctcgcagcgccgactggaagggcggctaaacgaatgacggaggcgacg
ggatatgaagcacagacgatacatcgtcttttggaagtaagcggaaatccggaagaaggc
aagactggaggatttggaagaaacagggaaaatccactggaaaccgatgcggttatcatc
gatgagatgtccatggtagatcttccgctgatgcatgcgctcctttcggcgatcgttccg
ggaacaaggctgatccttgtaggggatatcaatcagctgccgtctgtaggccctgggaaa
gtattgaaagatattatagattctaaggttttcagggtagttatgctgacaaaaattttt
cggcaggcacaggaaagcgatattgtcatgaacgcccacaagatcaatgctgggcaggaa
gtcgtccttgacaataaaagcaaagacttttttttcctgaaacggcaggatgccaatgta
attatcagcgtcgtcctgacattgatccagaaaaaattgcccaaatatgtggatgcacgt
atgtccgatatccaggtgcttactccgatgaaaaaaggactcctgggtgtggaacgatta
aatagaattttgcagcagtatctgaacccgccgtccgataagaaggcggagaaggaatac
ggagagaaattattccgtgtgggcgataaggttatgcaagtgaaaaataattatcaattg
gagtgggagatcgcaacaaagtatggtcttgtagtcgacaaaggtattggcgttttcaat
ggcgatatggggattataacaaagatcaatacatatgacgagacgctggaagtagaatat
gatgaaaaaaggaaggtaacctatcctttcaaaatgctggatgagctggagcttgcctat
gcagttacgatacataaatcacagggaagtgaatatccggcagtgatcattccgctgctt
gcaggtccgaggcagttatattgtcggaatcttttgtatactgctgtgacaagagcgagg
aaatgtgttacacttgtaggaagtgatactgtttttcaggagatgatccaaaatgtggaa
gaacagaaaagaaacacaagccttgcggagcacatagcagagtttttgtaa
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