Sellimonas caecigallum: ACI3DM_06265
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Entry
ACI3DM_06265 CDS
T10803
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
scag Sellimonas caecigallum
Brite
KEGG Orthology (KO) [BR:
scag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scag03032
]
ACI3DM_06265 (gyrB)
03400 DNA repair and recombination proteins [BR:
scag03400
]
ACI3DM_06265 (gyrB)
Enzymes [BR:
scag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACI3DM_06265 (gyrB)
DNA replication proteins [BR:
scag03032
]
Prokaryotic type
DNA Topoisomerases
ACI3DM_06265 (gyrB)
DNA repair and recombination proteins [BR:
scag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACI3DM_06265 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
XKQ22462
LinkDB
All DBs
Position
complement(1292835..1294748)
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AA seq
637 aa
AA seq
DB search
MSAEYGGDQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNAVDEALAGYCDTIEV
TVNADNSVTVIDNGRGIPTGINHKSGLPAVEVVFTVLHAGGKFGGGGYKVSGGLHGVGAS
VVNALSNWLVVEVWGDGKIHEQRYERGKVMYPLRVIGECSPEKTGTKVTFMPDDTIFEET
VFEYKVLKQRLREMAFLTKNLKIILRDDREEKREDVFHYEGGIREFVSYLNRSTEPLYEP
IIYCSGMKDDVYVEVAMQHNDSYSEGTYSFVNNITTPEGGTHVVGFRNALTKTFNAYAKK
NKLIKENEQSLSGDDIREGLTAIISVKIPEPQFEGQTKQKLGNSEARGAVDSIVSAQLEV
FLEQNPSVAKVIIEKSLMAQRAREAARKARDLTRRKSALETMSLPGKLADCSDKDPKNCE
IYIVEGDSAGGSAKTARDRATQAILPLRGKILNVEKARLDKIYANAEIKAMITAFGTGIH
EDFDISKLRYHKIIIMTDADVDGAHISTLLLTFLYRFMPELIKEGHVYLAKPPLYKLEKN
KKVWYAYSDEELNKILLEVGRDQNNKIQRYKGLGEMDAEQLWETTMDPQHRVLIRVTMDE
EASSELDLTFTTLMGDKVEPRREFIEENAKYVKNLDV
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagaatatggtggagatcaaatccagatattggaagggttggaagcagtacgc
aaaagaccggggatgtatatcgggagtacttctgcaagaggccttcatcacctggtatac
gagatcgtagacaatgcggtggatgaagcgctggcagggtactgcgatacgatcgaagtg
acggtcaatgcagacaattccgtgacagtcatcgacaacggaagaggcattccaaccggc
atcaaccataaatccgggcttcctgccgtggaagtcgtatttacggtacttcatgccggc
ggaaaattcggaggaggcggatacaaagtgtccggcggtctccacggtgtaggtgcgtcc
gtcgtcaatgccctttccaactggctggtagtggaagtatggggagacggaaagatccat
gagcagcgttatgagagaggaaaggtcatgtaccctcttcgggtaatcggagagtgcagt
ccggaaaaaacaggaacaaaagtcactttcatgccggatgacacgatttttgaagagaca
gtattcgagtacaaggtactcaaacagagactgagagaaatggcatttctgacgaaaaat
ctgaagatcattctcagggatgacagggaagaaaaacgcgaagatgtgttccactatgaa
ggtggaatccgcgaatttgtttcctacctgaaccgaagcacagagcctctctatgaaccg
atcatttattgctctgggatgaaagatgatgtctacgtggaagtggccatgcagcacaat
gattcctactcagaaggaacgtatagcttcgtaaacaatatcacgacgccggagggcggg
acacacgtggtaggatttcgaaatgccctgacaaagacattcaatgcctacgcaaagaaa
aataaacttatcaaagaaaacgagcagagcctgtcaggtgacgatatccgtgaaggactg
actgccatcatcagcgtcaagattccggaaccgcagtttgaaggacagacaaagcagaaa
ctcggaaacagcgaggcaagaggagcagtggacagcatcgtgagcgcgcagctggaagtg
ttcctggaacagaatccgtctgtggccaaagtcatcatcgaaaaatccttgatggcccaa
agagccagagaagcggcaagaaaagcgagggatcttacccgcagaaagtctgcccttgag
acgatgtcccttcctggaaagctggcagactgttctgataaagatccaaaaaactgtgag
atctacatcgtggaaggtgattccgccggcggatccgcaaagacggccagagaccgggct
acccaggcgatccttccgcttcgtggaaagattctcaacgtggaaaaagcacgtcttgac
aaaatttatgcaaacgcggagatcaaagcgatgatcacagcgtttggaacaggtatccat
gaagatttcgatatttccaaacttcgctatcataaaatcattatcatgactgatgccgac
gtggatggggcccacatcagcacattgctccttacgttcctttaccgatttatgccggaa
ctcatcaaagaaggacatgtgtatttagcaaaacctccgctctataaactggagaaaaat
aaaaaagtatggtacgcatacagcgacgaagaattaaataaaatccttttggaagtaggg
cgtgaccagaataataagatccagcgttacaaaggactcggcgagatggatgccgagcag
ttatgggagacgaccatggatccacagcaccgtgtgctgatccgtgttacaatggacgaa
gaagcctcctctgaactggatctgacatttaccacgctgatgggcgacaaagtagaaccg
cgccgggaattcatagaagaaaatgcaaaatacgtaaaaaatctggacgtatag
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