Sellimonas caecigallum: ACI3DM_07405
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Entry
ACI3DM_07405 CDS
T10803
Name
(GenBank) 3'-5' exoribonuclease YhaM family protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
scag Sellimonas caecigallum
Brite
KEGG Orthology (KO) [BR:
scag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scag03019
]
ACI3DM_07405
Messenger RNA biogenesis [BR:
scag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACI3DM_07405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
XKQ20227
LinkDB
All DBs
Position
1535566..1536510
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AA seq
314 aa
AA seq
DB search
MRYIRELHEGETIRAIYLCKSKRTAETRNGKPYDNLLLQDKTGTLDGKIWDPNSNGISDY
DEMDFVEIVGEVITYNNNLQLNIKQLRKAQEGEYILADYMPTSEKDADAMYTELLGFVNK
IQNNWLRQAVEFYFVKDEEFIRRFKNHSAAKSVHHGFCGGLLEHTLSILKLCEYYLSAYD
ILNADLLYAAAMYHDIGKTKELSAFPENDYTDDGQLLGHIVIGVEMFDEAVRTIPDFPPK
LASELKHCILAHHGELEYGSPKKPALAEALALNLADMTDAKMQTLKEIFKDKNTTEWLGY
NRLFESNLRKTSLS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagatatattcgagaactgcatgaaggggaaaccattcgtgcaatctatctgtgtaaa
tcaaaaagaacagccgaaacacgaaacggaaaaccatatgacaacctgcttttgcaggat
aaaacgggaaccttggacggaaagatctgggatccgaattccaacggtatctctgactat
gacgagatggattttgtggaaatcgtaggcgaagtcatcacatacaacaataacctgcag
ctgaatatcaaacagctcagaaaagcccaggaaggcgaatacattctggcagactacatg
ccgaccagcgagaaagatgcagacgcaatgtatacagaattgctgggatttgtaaacaag
atccagaacaactggctccgacaggcagtagagttctactttgtgaaggatgaggaattc
attcggagattcaagaaccattcggcggcaaaaagcgtccatcatggattctgcggagga
ctcttggaacacacgctcagcatcctgaagctgtgcgaatattatctgagcgcatatgat
atcctgaatgcagatcttctttatgcggcagctatgtaccatgatatcggcaagacaaag
gaactgtcggcatttccggaaaatgactataccgacgacggacagcttcttggccatatc
gtgatcggagtggagatgtttgacgaagcggtgcgcaccattccggacttcccgccaaaa
ctggcaagtgaattgaaacactgtatcctggcacatcacggagaactggagtacggctcc
ccgaaaaagccagcccttgcggaggctttggccttaaatctggccgacatgacagatgcc
aagatgcagacgttaaaagagatctttaaagacaagaatacgacagaatggcttggctac
aaccgcctttttgaatctaatctgagaaaaacaagcctttcctga
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