Sellimonas caecigallum: ACI3DM_08230
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Entry
ACI3DM_08230 CDS
T10803
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
scag Sellimonas caecigallum
Pathway
scag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACI3DM_08230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scag03021
]
ACI3DM_08230
03400 DNA repair and recombination proteins [BR:
scag03400
]
ACI3DM_08230
Enzymes [BR:
scag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACI3DM_08230
Transcription machinery [BR:
scag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACI3DM_08230
DNA repair and recombination proteins [BR:
scag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACI3DM_08230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
DUF4332
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
XKQ20385
LinkDB
All DBs
Position
1686834..1687793
Genome browser
AA seq
319 aa
AA seq
DB search
MFDFNKPNIEITEMSEDKRYGRFVVEPLERGYGTTLGNSLRRIMLSSLPGAAISQVKIDG
VLHEFSSIPGVKEDVTEIIMNLKALAIKNSSETDEPKTAYIEFEGEGVVTGADIQVDSDI
EIMNPDLVIATLNGGTDSKLYMELTITKGRGYVSSEKNKTEDLPIGVIPIDSIYTPVERV
NLTVQNTRVGQITDYDKLTLDVYTNGTLLPDEAVSLAAKVLNEHLKLFIDLSEVAQAAEV
MIEKEDDEKEKVLEMSIDELELSVRSYNCLKRAGINTVEELTNRTPEDMMKVRNLGRKSL
EEVLAKLKELGLELSQGEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgattttaataaaccgaatatcgaaatcacagaaatgtcagaagataaaagatat
ggaagatttgtcgtggaaccgctcgaaagaggatacggaacgacattgggtaacagcctc
agaagaattatgctgtcctcccttccgggcgcagccataagccaggtaaagatcgacggc
gttcttcatgaatttagttccattccgggtgtgaaagaggatgtaaccgagattatcatg
aatctgaaggcattagctattaaaaactcttcagaaacagatgaaccgaaaacagcttat
attgaatttgaaggagaaggtgttgtaacaggcgctgatatccaggttgattccgatatt
gagatcatgaatccggatctggtaatcgcgacactcaacggcggaacagacagtaagctt
tacatggaactgacgatcacaaaaggccgcggttatgtaagctcagagaagaacaagact
gaagaccttccgattggagtcattccgattgattccatttatacaccggtagagcgcgta
aatctgactgttcagaacactcgtgtcggacagatcacggactacgacaagctgactctg
gatgtatacacaaatggtacattacttccggatgaggcggtaagccttgctgcgaaagta
ctgaacgaacatctgaaacttttcatcgacctgtcagaagtagcacaggctgcggaagtt
atgatcgaaaaagaagacgatgaaaaagagaaagtgcttgaaatgagcattgatgaactt
gaactttccgttcgttcctacaattgcttgaagagagccggaatcaatacagtggaagaa
cttacaaacagaactcctgaagatatgatgaaagtacgtaacctgggacgcaagtctctg
gaagaggtacttgcaaaattgaaagaactcggcctggaattaagccagggcgaggagtaa
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integrated database retrieval system
