Sellimonas caecigallum: ACI3DM_09455
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Entry
ACI3DM_09455 CDS
T10803
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
scag Sellimonas caecigallum
Brite
Enzymes [BR:
scag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACI3DM_09455 (addB)
DNA repair and recombination proteins [BR:
scag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ACI3DM_09455 (addB)
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GFIT
Other DBs
NCBI-ProteinID:
XKQ20594
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Position
1945183..1948533
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AA seq
1116 aa
AA seq
DB search
MALQFIFGSSGSGKSHSLYQNIIKEALENPEKTYLVLVPEQFTMQTQKDLVMAHPGHAIL
NIDVLSFGRLAYRVMEETGGNQKIVLDDEGKNLILRKIAGDCEEELTVLKGNLKKQGYIS
EVKSVISEFTQYDIREETIDRMMEEAGKGSSLYYKLSDMKKVYKGFYQYLEEKYITKEEL
LDVLCGRVSGSDMLKGSVVALDGFTGFTPVQNRLVREFLRLCEDVRVTVTIPADEDPYVY
RGPYQLFSMSKEMTSKLLSICKEEGIHVKDPVVLDGKIPYRFRENSALAFLENHLFRYHR
AVYEKQQSAVRIHCASDPKQETEAAAQEIRRLVRKEGYRYRDIAVIASDLEIYSDQIRTV
FSRYGIPVFADQKRSVLLNPFVEYVRSAVSMVQKRFTCESVFRFLRTNLTGFTFEEVDEL
ENYVLAMGIRGYKRWQEKWVRKTRGMDEDGLLRVNHLRVRFVEKVDSLVFVLRQPRKTVV
DITRALYEFLVKEELQRQLREQEKRFEEQGKLALAKEYSQVYRIVIELFDKFAALLGDER
VTLEEYCDLLDAGLQEAKVGVIPPGTDEVVAGDIERTRIKDIRALFFLGANDTLLPGKMG
AGGILSEYDREKIKEADIKLSPGGKEKTYIQKFYLYMNLTKPSDRLYIFFSNVSSDGKSL
RPAYLVQDLRKLYPKLSVVREDERTLAETELTRETGIQALIKVMQEDEGMERADWKELYA
WYERRDETRTRIESVLDAYFGNKREDGIKEQTAKLLYEENIESGVTRLERYAACAFAHFM
AYGLRLNERQEYEFRPLDWGNIFHRAMEHVAKKLARMELSDGELPDDVRVRIAEESVEES
IVDYENTVLYSTKRREYLITRMKRLVERTVWALLKQQKRGDFVQTGAEVRFEGGKIDRID
TCETDDQVYVKVTDYKTGSKSFDIASFYYGIQLQLTVYMNAALEIEKRRHPGKEVIPAGI
FYYKMQDPIVEKTKAENLEEAILKELRPDGLINADPEVYRHFDREVQGSSLAAPFGVNKD
GSLKKTSKAATGEEFALLSRYTKRKTENLKEEILKGRTEAKPYELGTMTGCAYCPYQNIC
GFDERLSECTYRELAAMKRDEAFQKIREELEEEGDK
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggcattacagtttatttttgggagttccggttcagggaagtcccattctctatatcag
aacatcataaaggaagcgctggaaaatccggagaagacatatcttgtccttgtgccggag
cagtttacgatgcagacacagaaagacctggtcatggcacatccgggacatgccatttta
aatatcgatgtactgagttttgggcggctggcctaccgtgtcatggaagagacaggagga
aaccaaaagatcgtcctggacgatgaagggaaaaatctcattctgcggaagattgcagga
gactgtgaggaggagcttaccgtactgaaaggaaacctgaaaaagcagggatacatcagt
gaagtcaaatctgtcatctcggaatttacgcagtacgatattcgggaagaaacgatcgac
cgtatgatggaggaggcaggaaaaggaagttccctttattacaaactttccgatatgaaa
aaggtctacaagggattttaccagtatctggaagaaaaatatatcacaaaggaagaactt
ctggatgtcctgtgcggcagggtgtccggatcagatatgttgaaggggagtgtcgtcgcg
ctggatggatttacgggatttactccggtacagaaccgccttgtgagggagtttttaaga
ctctgtgaggatgtcagagtgaccgtcacgatacctgcggatgaagatccatatgtgtac
cggggaccgtatcagctcttttccatgagtaaggagatgacatccaagcttctttccatc
tgcaaagaggaagggatccatgtgaaagatccggttgttttggacgggaagatcccatac
cgttttcgggaaaattcagctctggcttttctggaaaatcatttattccgctatcataga
gcggtgtacgaaaagcagcagagtgctgtccggatccattgtgcatcagacccgaaacaa
gagacagaggcagcggcacaggaaatccgcagacttgtgcggaaggaaggctatcgctac
cgggatatcgcggtaatcgcaagtgatcttgaaatctactcggatcagattcgaacggtt
ttttcccggtatggtatcccggtgtttgcagaccaaaagagaagtgtacttttaaatcct
tttgtggaatatgtaagaagcgcagtctccatggtgcagaagcgttttacatgtgagagt
gtgtttcggtttctgaggacaaacctgacagggtttacttttgaggaagttgacgagtta
gaaaattatgtccttgcgatggggatcagaggttacaaaagatggcaggaaaaatgggtg
cgaaagacgcgggggatggatgaggatggacttttgagagtcaatcacctgagagtccga
tttgtggaaaaagtggattccctcgtttttgtactgagacagccgcggaaaacggttgtg
gatatcacgcgggcactgtatgagtttctcgtaaaagaagaattgcaaagacagttaaga
gaacaggaaaagcggtttgaggagcaagggaagcttgcacttgccaaagaatactctcag
gtataccggatcgtcattgaacttttcgacaagtttgcagcgcttctcggggatgaaagg
gttacgctggaagagtactgtgatctcctggatgcaggactacaggaggccaaagtcgga
gttataccacctgggacggatgaagtagtagccggagatatcgaacgtacgagaatcaaa
gatatccgtgcgctttttttcctcggagcaaacgacactcttcttcccgggaagatgggt
gcaggggggatcttgtccgagtatgacagagaaaagataaaggaagcggatatcaagctt
tcgccgggaggcaaagagaagacttatatacagaaattttatctttacatgaatctcaca
aagccttcagacaggctgtacatcttcttttccaatgtatcttccgacgggaagtccctt
cggccggcatatcttgtgcaggatctgagaaaattgtatccaaagctttctgtcgtgagg
gaagatgaaaggacgcttgcagagacagaactgacgagagagactggaattcaggcactg
ataaaagttatgcaggaagatgaggggatggaaagggcagactggaaagaactttatgct
tggtacgagcgtcgagatgaaacccggacacgcatcgaatcggtgctggatgcatatttc
ggaaacaagagggaagacgggatcaaagagcagacggccaaactcctctatgaggagaat
atagaaagcggagtgacaaggctggagaggtatgctgcatgtgcatttgcgcattttatg
gcgtacggactccgcctcaatgagcggcaggaatacgaattccggcccctggattggggg
aacattttccaccgcgccatggaacatgtggcaaaaaaacttgcgcgcatggaactttca
gacggagaactgccggatgatgtgcgtgtgaggattgcagaagagagcgtggaggaaagc
atcgtggattatgaaaatacagtcctctacagcacgaaacggagagaatacctgatcaca
aggatgaagcgtctggtcgaacggaccgtatgggcattgctaaagcagcaaaaaaggggg
gattttgttcagaccggagcggaagtcaggtttgaaggaggaaagatcgaccgtatcgat
acatgtgaaacagacgatcaggtttatgtgaaagtgacagattataagacgggatcgaaa
tcatttgatatcgcttctttttattatgggatccaacttcagcttaccgtttacatgaat
gcagcgctggagatagaaaagaggaggcatccgggaaaagaagtgattccggccggcatt
ttttattacaagatgcaggatcctatcgttgagaagacgaaggcagagaatctggaggag
gccattttaaaagagcttcgcccggacggactgatcaatgcggatccggaggtttacagg
catttcgaccgagaagtgcagggaagttctcttgctgctccgtttggagtcaacaaagac
ggaagtctgaaaaagacgtcaaaagcggccacaggggaagagtttgccctcctgtcccgt
tatacgaagcgcaagacagaaaacttaaaggaagagatcctgaagggaaggacagaggca
aagccatacgaacttggcacaatgacaggctgtgcgtattgtccgtaccagaatatctgt
gggtttgacgagcggctttcagagtgtacttacagggagcttgccgccatgaaacgggat
gaagcgttccaaaaaatccgagaggaactggaagaggaaggagacaagtag
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