Sellimonas caecigallum: ACI3DM_09460
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Entry
ACI3DM_09460 CDS
T10803
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
scag Sellimonas caecigallum
Brite
KEGG Orthology (KO) [BR:
scag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scag03400
]
ACI3DM_09460 (addA)
Enzymes [BR:
scag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACI3DM_09460 (addA)
DNA repair and recombination proteins [BR:
scag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ACI3DM_09460 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_16
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
XKQ20595
LinkDB
All DBs
Position
1948537..1952100
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AA seq
1187 aa
AA seq
DB search
MGVSWTKEQQQVISLRNRNILVSAAAGSGKTAVLVERIITRLTDEKSPLDVDRLLVVTFT
EAAAAEMKERIRGAIEKKLEEDPENVHLQRQATMIHHAQITTIHSFCLSVIKDYFHTIDL
EPGFRTAEEGERKLLMQEVMEELLEKAYEEASEPFLFFAEAMAPGRDDKKLEELIFELYE
FSRSNPKPEEWLEQCAVSYEKAGTCKWDELSFVQCAAKNTCKYLEDMEESLLFAKSVCQE
ADGPAVYEKVIDSDIGKIRDFSSADGFTELQKKMAGLKFDRLPSNRDPSVSEEKAELVKK
LRDQVKKEISSLKEQYFQEPAMELQKDMEMAAPVARELVRLTILFARAFEEKKQERNMID
FSDMEQYALRILEHEEVADEFRDRFEEVMIDEYQDSNLIQETLLMQISRMKRGQYNVFMV
GDVKQSIYSFRLSRPELFMEKYESYSMEDGKEQRIDLHKNFRSRREVLDAINFLFYQIMT
KELGKIQYDENAALYVGATFEEAKDCETELLLIEEGEELPARELEARAVAAKIKDIVKHG
QVKDKETGRYRNASYKDIVILLRSLQGWSDVFAKVLSEQGIPTYSGTKEGYFKTREIGLL
LDYLRVLDNEKQDLPLTAVLTSVFGKMTDEELAQIRLAYPNLPYHEAVSRYRQEHENKKL
QEFYDMLRRFREKVPYTAMHELLEELVTETGYRDHILAMPGGIQRSANLDMLIEKAKAFE
SSSYKGLFHFIRYIEQLKKYDIDYGEAITMDENADTVRIMSIHKSKGLEFPVVIAAGMGK
RFNLQDITRKVVIHQDFGIGLDAVYLKERMQTASFLKKVIQKEIRLENLGEELRVLYVAL
TRAKEKLIMTGVVGNAAESLQKYERIRRREVLPLSFGTLASAGTYLDFLLPAMVRLEDRK
RNGEEIPLRMDVISEKEILLETSLEEVQKQITREDIRAMDIHTVYDSQMKEKLSESFSFC
YPYLEESGWSRKFTVSELKRRAYEPETAKEETDGEQLYKEDPEDIIPAFMKEEVAVEGAS
RGTAYHRILELLDFTATYTEKELNTAIASFVKENKITDEAAKAVGRKGILTFLGSECAGR
IRKAALEGKLKKEQPFVFGIPASRIYDVSEGNEETILIQGIIDLYFEEDGEIVLLDYKTD
WVKKEEELREKYRIQLDYYAEALEKSLGKKVKEKIIYSFALRKEIRV
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgtcatggacaaaagagcagcagcaggttatttctctgagaaatagaaatatt
ttagtctccgcagcagcaggttcgggcaagacggcagtactcgtggagagaatcataacg
aggcttacggatgaaaagagccctctggacgtggatcggcttttggtcgttacatttact
gaggcggcagcggcggagatgaaagagaggatccgaggggccatcgagaaaaagctggaa
gaggatccggaaaatgtacatttgcagcgtcaggcgacaatgatccaccatgcgcagatc
acaacgatccacagtttctgtctttccgtcatcaaagactatttccatacgatcgatctg
gagccgggatttcggacagctgaggaaggagaacgaaaacttctcatgcaggaagtcatg
gaagaacttttggagaaagcgtatgaggaagcttcagagccattcctgttttttgctgaa
gccatggctcccggaagagatgacaaaaaactggaagaactgatctttgaactctacgaa
ttttcaaggagcaatccaaaaccggaggagtggcttgaacagtgtgcggtaagctatgag
aaagcaggaacctgcaaatgggatgaactttcgtttgtgcagtgtgcggcaaagaatacg
tgcaagtatctggaagatatggaggaaagcctcctgtttgccaagtctgtctgccaggaa
gcagatgggccggcggtatatgaaaaggttattgattccgatatcggcaagatccgggat
ttttcttctgccgacggattcacggaacttcagaaaaaaatggcaggattgaaatttgat
cgccttccatccaacagggatccgtctgtgtcggaagaaaaggcagagcttgtaaaaaaa
ttaagggaccaggtcaaaaaagaaatatccagcctgaaagaacagtattttcaggagccg
gccatggagctccaaaaggatatggagatggctgcccctgtggcccgtgagcttgttcgg
ctgacgattctttttgcaagggcatttgaagaaaagaagcaagaacggaacatgatcgat
ttcagtgatatggaacagtatgcactgagaatcctggaacatgaagaggtggcagacgaa
ttccgggacagattcgaggaagtcatgatcgacgaataccaggacagcaatctcattcag
gagacattgctgatgcagatttccaggatgaaaagagggcagtacaatgtattcatggta
ggagatgtaaagcagagtatctacagtttccgattgtccagaccggaactttttatggag
aaatatgagtcctattccatggaagacggaaaggaacagcggatcgatctgcataaaaat
ttccgaagcagaagagaagtacttgatgcgatcaattttctgttttatcaaattatgaca
aaggaacttgggaaaattcagtacgatgaaaatgcggccctgtatgtgggagccactttc
gaagaggcgaaagattgcgaaaccgaactgcttctcatagaagaaggggaagagcttccg
gcaagagagctggaggcaagagctgtggcggcgaaaatcaaggatatcgtaaagcatggg
caggtcaaagataaagagaccggacgataccgaaatgcttcctacaaagatattgtgatc
cttctcagaagtctccagggatggagcgacgtgtttgccaaagtgttgagcgaacaggga
attcccacatacagtgggacaaaagaaggatatttcaagacgagggagatcggacttctg
cttgattatcttcgggtgctggacaacgaaaagcaggatctgccgcttacggcagtgctt
acgtctgtttttggaaagatgacagatgaggagctggcacagatccgcctggcctaccca
aatcttccataccatgaggcagtgtcacgatacagacaggaacatgaaaacaagaaactg
caggaattttacgatatgctgagaagatttcgggaaaaagttccgtatacggccatgcat
gagcttctggaagagcttgtgacagaaacaggatacagggatcatattctcgccatgccg
ggagggatccagcggagcgccaacctggatatgctgatagaaaaagcgaaggcttttgaa
agctccagctacaaaggcctttttcactttatccgttatatagagcagctgaaaaaatac
gatatcgactacggggaagccatcacaatggatgaaaatgcagacactgtccggatcatg
agtatccacaagagtaaaggactggaatttcctgtcgtaatcgcagccgggatgggaaag
aggttcaatcttcaggatattacgagaaaagttgtgatccatcaggattttgggattgga
cttgacgcagtctatctcaaagagcggatgcagacagcttcctttttaaagaaagttatt
caaaaagaaatccggctggaaaatctcggcgaagaacttcgggtgctgtatgtggcgctc
acaagggcaaaggaaaaactcatcatgacaggtgtcgtgggtaatgcggcggaaagtctg
caaaaatatgaacggatccggagacgggaagtactcccactctcttttggaactcttgca
tcagcaggaacttatctggactttcttcttccggcgatggtacgcctggaagacaggaag
cgaaacggggaagaaattccacttcgcatggatgtgatcagtgaaaaagagattcttctg
gagaccagtctggaagaagtgcaaaagcagatcacaagggaagatatccgagcaatggat
attcatactgtgtatgattcacagatgaaagagaaactttcggagtcattttccttttgc
tatccgtacctggaagagagcggatggagcagaaaatttacggtgtcggaattgaaacga
agagcgtatgagccggagacagcaaaggaagagacagacggggagcagctctacaaagag
gatccggaggatatcattccggcatttatgaaggaagaagtggctgtagagggagcttcc
agggggacagcctaccatcggatactggaacttttggacttcacagcaacatatacggag
aaagaactcaacaccgccatcgcatcttttgtaaaagaaaataaaattacagatgaggcg
gcaaaagcagttgggagaaaagggatccttacatttcttggctcggaatgtgccgggcgc
atcagaaaagcagctcttgaaggaaaactaaaaaaagagcagccatttgtctttggaatt
ccggccagtcgaatctatgatgtgtcggaagggaacgaagagacgattctgatacaggga
atcattgatctttattttgaggaagacggggagattgttctgctggattataaaacagac
tgggtcaaaaaagaagaggaactaagagaaaagtaccgtattcagttggattattatgcg
gaggctctggaaaaaagcctgggaaaaaaagtaaaggaaaaaatcatttattcctttgct
cttcgaaaagagatacgggtatag
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