Sellimonas caecigallum: ACI3DM_10570
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Entry
ACI3DM_10570 CDS
T10803
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
scag Sellimonas caecigallum
Brite
KEGG Orthology (KO) [BR:
scag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scag03032
]
ACI3DM_10570
03400 DNA repair and recombination proteins [BR:
scag03400
]
ACI3DM_10570
Enzymes [BR:
scag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACI3DM_10570
DNA replication proteins [BR:
scag03032
]
Prokaryotic type
DNA Topoisomerases
ACI3DM_10570
DNA repair and recombination proteins [BR:
scag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACI3DM_10570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
XKQ20793
LinkDB
All DBs
Position
2197294..2199216
Genome browser
AA seq
640 aa
AA seq
DB search
MANHVTYDADSITILEGLEAVRKRPGMYIGSVGTKGLNHLVYEIVDNAVDEHLAGYGDRI
EVTLEKDGSATVSDNGRGVPVGMHQKGVSAARIVYTTLHAGGKFDDAAYKTSGGLHGVGS
SVVNALSEYMDVKISRDGAIHHDRYERGVPVVELSDGLLPVVGKTKKTGTTVNFLPDAEI
FEKTRFREEEIKSRLHETAYLNPALTIVFRDKRKDPEECIAYHEPDGLIGFIKDLNKKSE
AVHDPVYFKGEAEGIEVEVVFQYVTEFHENILGFCNNIYNAEGGTHLTGFKSTFTTIMNQ
YAREIGVLKEKDDKFTGTDIRNGMTAIVSVKHPDPRFEGQTKTKLDNQDASRAVGKVTGE
EIVRYFDRNLEVLKNVLACAEKAAKIRKTEERAKTNLLTRQKYSFDSNGKLANCESRDAK
KCEIFIVEGDSAGGSAKTARDRMYQAILPIRGKILNVEKASIDKVLANAEIKTMINAFGC
GFSEGYGNDFDITKLRYDKIIIMADADVDGAHISTLLLTLFYRFMPELIYEGHVYIAMPP
LYKAMPKKGKEEYLYDDKALERYRKRQTGPFTLQRYKGLGEMDAQQLWETTLDPKTRILK
RVEIEDARMASSVTEMLMGTEVPPRRTFIYENAREAELDI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcatgtgacatatgatgcagacagcataacgatactggaaggtctggaagca
gttcggaaaagaccgggaatgtacatcggaagtgtcgggacaaaagggctcaaccatctt
gtgtacgagatcgttgacaatgcagtggatgagcatcttgcaggttacggcgaccggatc
gaagtgacgctggaaaaagacgggtctgccactgtctctgacaatggacggggagtgccg
gtcggtatgcatcaaaaaggagtatccgctgcccgcatcgtgtacacgacgctgcatgcg
ggcgggaaatttgacgatgctgcgtataagacaagcggagggcttcatggggttggttcc
tccgtcgtcaatgcgctttccgaatatatggatgtcaagatcagccgtgacggagcgatc
caccatgaccggtatgaaagaggagtgccggtggttgagctttcggatggacttcttcct
gttgtcgggaagacaaaaaagaccgggacaacagtaaatttcctgccggatgcggagatt
tttgaaaagacaaggtttcgggaagaagaaatcaaaagcaggcttcacgagacggcgtac
ttaaatcctgccctcacgatcgttttcagggacaaacggaaagatcccgaggaatgtatc
gcttaccatgagccggacgggctgatcggttttataaaagatctgaataaaaaaagtgaa
gcagttcacgatcccgtctattttaaaggagaggcagaagggattgaggtggaagttgtg
ttccagtatgtcacggagtttcatgagaatattctgggcttctgcaacaatatttataat
gccgagggaggaactcatcttaccggatttaaatccacttttaccacgatcatgaaccag
tatgcgcgagagatcggagtgttgaaagagaaggatgacaagtttaccggaacagatatc
cgaaacgggatgacggccattgtctcggtaaaacatccggatccacggtttgaaggacag
acaaaaacaaagcttgacaaccaggatgcgtcgagagctgttggaaaagtgacaggcgaa
gagatcgttcggtattttgacaggaatcttgaagtgctgaagaatgttctggcctgcgcg
gagaaagcggctaagatccggaagacggaagaacgggcaaagacgaatcttctgacccgt
caaaagtattctttcgacagcaatgggaaacttgcaaactgcgagagcagagacgcaaaa
aaatgtgagatattcattgtggaaggggattctgccggcggatccgcaaagactgccaga
gaccgcatgtaccaggccatcctcccgatccggggaaagatactcaatgtggagaaggca
agtatcgacaaagtccttgccaatgctgagatcaagacgatgatcaatgcctttggctgt
gggttttccgaagggtacggaaacgactttgacattacaaaactccggtatgacaagatc
atcatcatggctgatgcagatgtagacggagcgcatatttccacccttctgctgactctt
ttttaccgctttatgccggaactgatctacgagggccatgtatatattgccatgccgcct
ctttacaaggctatgccaaagaaggggaaagaagagtatctgtatgacgacaaagcgctg
gagaggtaccggaaacgtcagaccggaccgtttactctccagagatacaaagggctcggg
gagatggatgcccagcagctttgggagacgacgctggatccgaagacaaggatcttaaag
cgggtagagatcgaggacgcaaggatggcgtccagcgtgacggagatgctgatgggaaca
gaagtacccccgagacggacttttatctatgaaaacgcccgcgaggcggagctggatata
taa
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