Sellimonas caecigallum: ACI3DM_10625
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Entry
ACI3DM_10625 CDS
T10803
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scag Sellimonas caecigallum
Brite
KEGG Orthology (KO) [BR:
scag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scag03016
]
ACI3DM_10625 (truB)
Enzymes [BR:
scag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACI3DM_10625 (truB)
Transfer RNA biogenesis [BR:
scag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACI3DM_10625 (truB)
Prokaryotic type
ACI3DM_10625 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XKQ20804
LinkDB
All DBs
Position
2212460..2213374
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AA seq
304 aa
AA seq
DB search
MIDGIINVRKEKGFTSHDVVAKLRGITRQKKIGHTGTLDPDATGVLPVCFGKATKLCDML
TEKEKAYEAVLLLGKTTDTQDISGEVKKECSVEGITQDQVRETILSFVGEYDQIPPMYSA
LKVNGKKLYELAREGVEIERKPRKIQIHRIEIREINLPEVRFEVWCSKGTYIRTLCNDIG
EKLGCGGCMSSLIRTKSGIFTLEESKSLDEIETCVREGRIEEILVPIDAMFPDVPKVFVK
EGEEKSVYNGNALTKRQLEENTMPQSQERIRVYQKDGLFLALYRYDSKENRYKVEKMFYS
PRQQ
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacggtatcatcaatgtaagaaaagaaaaaggatttacttcccacgatgtggta
gcgaaacttcgcgggatcacacgccagaaaaagatcggccatacagggacgcttgatccg
gatgccacaggtgtccttccggtgtgttttggaaaagctacgaagctgtgcgacatgctc
acggagaaagaaaaagcgtacgaggcagtgctgcttttgggaaagacgacagatacccag
gacatctcgggagaagtgaaaaaagagtgctctgtggagggaatcacgcaagatcaggtc
cgggagacaattctctcctttgtcggggagtacgaccagatccctccgatgtactctgcg
ctcaaagtcaatgggaaaaaactctacgaactggcgagggagggcgtggagattgagaga
aaaccgagaaaaatccagatccaccgtattgagatccgtgaaatcaaccttccggaagta
cggtttgaagtctggtgctccaaggggacatatatacggaccctctgtaatgatatcgga
gagaagctcggatgcgggggatgtatgtcctcactcatccggacaaaatccggaattttt
accctggaagagagcaaaagccttgatgagatcgagacatgcgtacgggaaggaaggatt
gaagaaattctagtaccgatagacgcgatgttcccggatgtgccaaaggtatttgtaaaa
gaaggggaggaaaaaagcgtatacaacggaaacgcattgacgaaaagacagctggaagaa
aacacaatgcctcagagccaggagcggatccgtgtataccaaaaagacggcctgtttctt
gcgctgtaccgctatgacagcaaagaaaacagatacaaggtagaaaaaatgttttacagt
cccagacagcaatag
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