Sellimonas caecigallum: ACI3DM_10640
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Entry
ACI3DM_10640 CDS
T10803
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
scag Sellimonas caecigallum
Pathway
scag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACI3DM_10640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scag03019
]
ACI3DM_10640
03016 Transfer RNA biogenesis [BR:
scag03016
]
ACI3DM_10640
Enzymes [BR:
scag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACI3DM_10640
Messenger RNA biogenesis [BR:
scag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACI3DM_10640
Transfer RNA biogenesis [BR:
scag03016
]
Prokaryotic type
tRNA degradation factors
ACI3DM_10640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
MUG2_C
KH_N4BP1_2nd
Motif
Other DBs
NCBI-ProteinID:
XKQ20807
LinkDB
All DBs
Position
2214958..2217054
Genome browser
AA seq
698 aa
AA seq
DB search
MYKTFEMELAGRTLRVDIGRVAKQANGAAFMHYGETTVLSTATASEKPREGIDFFPLNVE
YNEKLYAVGKIPGGFNKREGKASENAILTDRVIDRPMRPLFPKDYRNDVTLENLVLSVDQ
DCSPELTAMLGSAIAVAISDIPFDGPTASTQVGLVDGELVFNPTAAQKAASDMQLTVAST
REKVIMIEAGANEVPEDKMLEAIFAAHEVNQKIIAFIDTIVAECGKPKHEYESFAVPEEL
FQAIKEIVPPEEMEEAVFTDDKQTREENIRKIQDRLEEVFAENEEWLPRIGEALYQYQKK
TVRKMILKDHKRPDGRAIDQIRPLAAEVDLIPRVHGSAMFTRGQTQICNITTLAPLSEAQ
KVDGLDEAETSKRYMHHYNFPSYSVGETKPSRGPGRREIGHGALAERALVPVLPTEEEFP
YAIRTVSETFESNGSTSQASVCASSMSLMAAGVPIKSAVAGISCGLVTGDTDDDYIVLTD
IQGLEDFFGDMDFKVAGTHKGITAIQMDIKIHGLTKPIIEEAIARTRKARLYIIDEVMNK
AISEPRPEVGKYAPKIIQMNIDPQKIGDVVGQRGKTINAIIEKTGVKIDITDDGSVSICG
TDKEMMDEAKRLITIIVTDFEAGQVLEGTVVSIKDFGAFLEFAPGKEGMVHISKICKRRI
EHVEEVLTLGDRVKAVCLGKDKMGRISFSIKDVAEENK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagacatttgaaatggaactcgccggacgtactctcagagtcgatatcggacga
gtggcaaaacaggcaaatggtgcagcgtttatgcactatggcgagacgaccgtattatcc
acagctacggcttctgaaaagccgagagaagggattgatttcttcccgctcaacgtggaa
tacaatgaaaaactttacgcagtaggaaagattcctggcgggttcaataagagagaagga
aaagcgtctgaaaatgcgatcctgacagaccgcgtgatcgacagaccgatgcgtccgctt
ttcccgaaagattacagaaatgatgtgacactggaaaacctcgtgctctctgtagaccag
gactgcagcccggaacttacggcaatgcttggttccgccatcgctgtggcgatctcagat
atcccgtttgatggtccgactgcatccactcaggtagggcttgtggacggagaactcgtg
ttcaacccgactgcagcacagaaagcagcttctgatatgcagctcactgtcgcttccaca
agagaaaaagttatcatgatcgaagcgggagcaaacgaagttccggaagataagatgctg
gaagcgatctttgccgctcacgaagtgaaccagaagatcatagcttttatcgatactatc
gtggcagaatgcggaaaaccgaagcatgaatacgaaagctttgcagtgccggaagaactg
ttccaggccatcaaagagatcgttcctccggaagagatggaagaagctgtatttacagat
gataaacagacaagagaagaaaatatccgcaagatccaggacagactggaagaagtattt
gcagaaaacgaagagtggctgccgcgtatcggggaagcactctatcagtatcagaaaaag
actgtgcgcaaaatgatcctgaaagatcacaaacgtccagatggaagagctatcgatcag
atccgcccgctggcagcagaagtagatctgattcctagagtgcatggttctgctatgttc
acaagaggacagactcagatttgcaacattaccacactggctccgctttctgaggcacag
aaggtggacgggctggatgaagcagaaacgtccaaacgttatatgcatcactacaatttc
ccgtcctactctgtaggagagacaaaaccgtccagaggaccaggacgccgtgagatcgga
catggagcgcttgcagagcgtgcgcttgtgccggtactgccgacagaggaagaattcccg
tatgcgatccgtacggtttccgagacatttgagtccaacggatctacttctcaggccagc
gtctgcgcatccagtatgtcacttatggcggctggtgttccgatcaagagtgctgttgcc
ggaatttcctgcggtcttgtgacaggagatacagatgatgactatatcgtgctcacagac
atccagggactggaagacttctttggggatatggacttcaaggtagcaggaacacacaaa
ggtatcactgcgatccagatggatatcaagattcacggactgacaaaaccgatcatcgag
gaagccatcgcccgcacacgtaaggcgagactttacatcatcgatgaagttatgaacaaa
gccatctccgagccgagaccggaagtgggcaaatatgcgccgaagatcattcagatgaac
attgatccgcagaagatcggcgatgtggtaggccagagaggaaagacgatcaacgctatc
atcgagaagacaggcgtgaagatcgatattaccgatgatggaagcgtatccatctgcgga
acagataaagagatgatggatgaagcaaaacgcctcatcacgatcatcgtcacggacttc
gaagcaggacaggtactggaaggaacagtcgtgagcattaaagattttggcgcgttcctc
gagtttgcacctggaaaagaaggaatggttcacatttcaaaaatctgcaaacgccgcatc
gaacacgttgaagaggttctgacgctgggagacagagtaaaggcagtgtgccttgggaaa
gacaagatgggaagaatcagtttcagcatcaaagacgtggcagaagagaataaataa
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