Sellimonas caecigallum: ACI3DM_11040
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Entry
ACI3DM_11040 CDS
T10803
Name
(GenBank) sigma factor
KO
K03093
RNA polymerase sigma-I factor
Organism
scag Sellimonas caecigallum
Brite
KEGG Orthology (KO) [BR:
scag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scag03021
]
ACI3DM_11040
Transcription machinery [BR:
scag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACI3DM_11040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Mga
Myb_DNA-bind_7
Vps39_1
Motif
Other DBs
NCBI-ProteinID:
XKQ20883
LinkDB
All DBs
Position
complement(2297325..2298041)
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AA seq
238 aa
AA seq
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MNELHDLADQVYTAKTDPEVADALIRQYMGFIRAETIKFIKRTPIEGQDEELSIVMLAFY
EAILNYERKRGAFLAFASRGIRNRLIDYYRKEKRHAKVVSLHEPLQDDEEDTLKIDHLED
PKNEIEMTHQRAAAKEEIEEFERQLLTFGISFSEVADNCPRQKRTLQACEKVLSAAKQNP
DLLNEMLHTKKLPITALVQHSGVDKKTIERHRKYLIAILLAFTNGYEIIRGHLYHLSP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaactgcatgatcttgctgatcaagtatacactgccaagacagatccagaagtg
gcagatgctttgattcgtcagtatatggggtttatccgtgctgaaacaataaaattcatt
aaacggacccccatcgaagggcaggacgaagaactaagcatcgtgatgcttgccttttac
gaagcgattttaaattatgaaaggaagcgaggagcttttctcgcatttgcatcccgtggt
atacgcaaccggctgatcgattattacagaaaagaaaagcggcatgcaaaagtagtttcc
ctccacgagcctttgcaggacgacgaagaagatactctgaaaatcgaccatctggaggat
cctaaaaatgaaatcgaaatgacacaccagcgtgccgcagcaaaagaagaaatcgaagaa
ttcgaaagacagcttcttacgtttggaatttctttttctgaggtggcagacaactgtcca
aggcagaagcgaactttacaggcctgtgaaaaagtcctgtccgccgcaaaacaaaatccg
gatcttcttaatgagatgctacatacaaaaaaacttccgataacagctcttgtacaacac
tctggagtagataaaaaaacaatagaaaggcaccggaaatatctgattgcaattttgctt
gcatttactaatggatatgaaatcatccgcggacatctctatcatctgtccccttaa
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