Sellimonas caecigallum: ACI3DM_11600
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Entry
ACI3DM_11600 CDS
T10803
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scag Sellimonas caecigallum
Pathway
scag03030
DNA replication
scag03410
Base excision repair
scag03420
Nucleotide excision repair
scag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACI3DM_11600 (polA)
03410 Base excision repair
ACI3DM_11600 (polA)
03420 Nucleotide excision repair
ACI3DM_11600 (polA)
03440 Homologous recombination
ACI3DM_11600 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scag03032
]
ACI3DM_11600 (polA)
03400 DNA repair and recombination proteins [BR:
scag03400
]
ACI3DM_11600 (polA)
Enzymes [BR:
scag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACI3DM_11600 (polA)
DNA replication proteins [BR:
scag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACI3DM_11600 (polA)
DNA repair and recombination proteins [BR:
scag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACI3DM_11600 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACI3DM_11600 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
XPG_I
BIG2_C
Motif
Other DBs
NCBI-ProteinID:
XKQ20986
LinkDB
All DBs
Position
2412410..2415049
Genome browser
AA seq
879 aa
AA seq
DB search
MTMNERQYENQKILLIDGHSILNRAFYGIPDLTNAEGLHTNAIYGFLNILFKVLEEEKPE
YLTVAFDVHAPTFRHEMFEDYKGTRKPMAEELRQQVPVMKEVLQAMGIRIVEQAGLEADD
LIGTLSKRGEKEGMNVVVLSGDRDLLQLATEKVKIRIPKTKQGRTEVEDYLAADVKEKYQ
VTPQEFIDVKALMGDSSDNIPGVPSIGEKTATKIIVEYGSIENAYSHVEELKPPRAAKAL
KEHYDMAQMSKALATINVDADFPYEFSEGKIGNLYTQEAYEYFQRLQFKNLLGRFDVESP
ANQIEDQFREITKEEEAEAVFEKAAGAPCVGIAFEKDTENVLPLFKDQAGLSGIGVAFGE
DQIYNIRTSDTMTETYLLEKVTSLTESRAVISMFDVKAAMKQIQIRKPENTFDVHVAAYL
LNPLKSAYETDDIAHEYLDLNIDEKLPAEKKTCYEAYTMFRAEKVLREKLREYEMEALFD
EIEMPLVFTLSDMEKAGVRIAADQLKMYGSELGDKIEELEKEIYDLAQETFNINSPKQLG
VVLFEHLELPHGKKTKTGYSTAADILEKLAPDYPIVSKILEYRQLAKLKSTYADGLANFI
SDDGRIHGTFNQTVTATGRISSTEPNLQNIPIRMELGRLIRKVFIPEEGYVFVDADYSQI
ELRILAHCSGDEALIHAYQEAQDIHRITASQVFHTPFEEVTDLQRRNAKAVNFGIVYGIS
SFGLSQDLSITRKEAGEYIDRYFETYPGVKAYLDGEVAFGKENGYVKTMFGRRRPIPELS
SSNFMQRSFGERVAMNSPIQGAAADIMKIAMIRVGRALRSRGLKSRIVIQVHDELLIETK
KEEVEIVKQILKEEMEHAADLRVPLIADMSQGSSWYEAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgaatgaaagacagtatgaaaatcagaaaattcttctgatagacgggcacagt
attctgaatcgtgccttttatggaatcccggatctgaccaatgcggagggacttcacacg
aacgcgatatacggatttttgaatattcttttcaaagtgctggaagaagaaaaaccagaa
tatcttacagtggcatttgacgtccatgcgccgaccttccgtcatgaaatgtttgaagac
tacaaagggacgagaaagccgatggctgaagaactgcgccagcaggttccggtcatgaag
gaagtccttcaggcaatgggcatccgaatcgtagagcaggccgggcttgaagcagatgac
ctgatcggcacactttcgaaacgtggcgagaaggaaggcatgaatgtggtcgttttgtcc
ggagaccgggatcttctgcagcttgccacagaaaaagtaaagattcgtattccaaagaca
aagcaaggccggacagaggtagaggactatcttgcagcggatgtcaaagagaaataccag
gtaacgccgcaggagtttattgatgtcaaagcattgatgggagacagctcggacaatatt
cctggggtgccaagtattggcgagaagacggccacaaagatcattgtggaatatggatcc
attgaaaatgcgtatagtcatgtggaagaactcaaaccgccgcgggccgcaaaggctttg
aaagaacactatgatatggctcagatgagcaaggcacttgcgactatcaacgtggatgcg
gatttcccttatgagttttcagaaggaaagataggaaatctgtacacgcaagaagcctac
gaatatttccagagactgcagtttaaaaatctgcttggacgctttgatgtggagagcccg
gcaaatcagattgaagatcagttccgggagatcacaaaagaagaggaggcagaagcagtc
tttgaaaaggctgcaggtgctccttgtgtcgggatcgcatttgagaaagacacagaaaat
gttcttccgcttttcaaagatcaggcggggctttccggaatcggggttgcatttggggaa
gaccagatctacaacattcggacatccgacacaatgacagaaacatatcttctggagaaa
gtgacgtctctcactgaatcccgtgcagttatttccatgtttgatgtgaaagcggccatg
aaacagattcagatccggaagccggaaaatacgtttgatgtccatgtggcagcttacttg
ttaaatcctttgaaaagcgcgtatgagacagatgacattgcccatgaatacctggatctg
aatatcgatgagaaacttccggcggagaaaaagacatgttatgaagcatatactatgttc
cgggcggaaaaagtgctgagagaaaaacttcgggaatatgagatggaggcgctgtttgac
gagatagagatgccgctcgtgtttaccctttctgacatggaaaaagctggtgtaaggatt
gcggcagatcagctgaaaatgtacggttcggaactgggagataaaatagaagagctggaa
aaggaaatatacgatctggcccaagagacgtttaacatcaattctccgaaacagcttggg
gttgtgctttttgagcatctggagcttccgcacggaaaaaagacaaagaccggatattct
acggcggctgatatcttggaaaaactggcgcctgattacccgatcgtatcgaagattctg
gaataccggcagcttgcgaaactgaagtccacttatgcagacggacttgccaattttata
tcggacgacggaaggatccacgggacattcaaccagacagtgactgccacagggcggatc
agcagtacagaaccaaaccttcagaacattccgatccgtatggaacttggaagattgatc
cggaaagtttttataccggaagaaggttatgtatttgtagacgctgattattcccagatc
gaactgcgtattctggcacactgctccggggatgaagcgctgatccatgcatatcaggag
gcacaggatatccaccggatcacagcgtcgcaagtatttcacacaccgtttgaggaagtc
acggacttacagagaagaaatgccaaagcggtaaatttcggaattgtctacggaatcagt
tcttttggactgagccaggatctgagtattacgagaaaagaagccggggaatatattgat
cggtactttgagacttatccgggtgtgaaagcatacctggacggagaagttgcttttggc
aaggaaaacggctatgtaaagacaatgtttggaaggcgcaggccgataccggaattgtct
tccagtaatttcatgcagcgcagctttggagagagggttgctatgaattcgcctatccag
ggggcggcagcagatatcatgaagattgccatgatccgggtaggacgggcattgcgcagc
cgtgggctgaaatccaggattgtgatccaggtacatgatgagcttttgatcgagacgaaa
aaggaagaagtcgagatcgtgaagcagattttaaaagaggaaatggaacatgcagctgat
ctgagggtaccgctgatcgcggacatgagccagggaagcagctggtatgaagcgaagtaa
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