Streptococcus canis: NCTC12191_00112
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Entry
NCTC12191_00112 CDS
T07143
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
scai
Streptococcus canis
Pathway
scai03030
DNA replication
scai03430
Mismatch repair
scai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12191_00112 (holB)
03430 Mismatch repair
NCTC12191_00112 (holB)
03440 Homologous recombination
NCTC12191_00112 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scai03032
]
NCTC12191_00112 (holB)
03400 DNA repair and recombination proteins [BR:
scai03400
]
NCTC12191_00112 (holB)
Enzymes [BR:
scai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12191_00112 (holB)
DNA replication proteins [BR:
scai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12191_00112 (holB)
DNA repair and recombination proteins [BR:
scai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12191_00112 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Defensin_5
ACT_3
Med15_M
Motif
Other DBs
NCBI-ProteinID:
VEE24006
LinkDB
All DBs
Position
1:complement(121866..122738)
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AA seq
290 aa
AA seq
DB search
MDLAQKAPKVYQAFQEILKKDRLNHAYLFSGDFANAEMALFLAKVIFCEYTNGQTPCGHC
RSCHLIDQGDFADVTVLEPTGQVIKTETVKEMMANFSQTGYEGKRQVFIIKDCDKMHVNA
ANSLLKYIEEPQGHTYIFLLTNDDNQVLPTIKSRTQVFQFPKNETYLFQLAQEQGLLKSQ
ADLLAKLAKNTDQLKDLAQNSKVLEVMAQTERFVFIWLKDQLQAYLALNRLVQLATEKEE
QDLVLTLLTLLLAREQSQTSCQQLEAVYQARLMWQSNVNFQNTLEYMVMS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggatttagcacagaaggctcccaaagtctatcaagcatttcaagaaattttaaagaag
gaccgtctaaaccatgcctatcttttttcgggtgattttgccaatgccgagatggctctt
tttttagccaaggtgattttttgtgaatacacaaatggtcaaacaccttgcgggcattgt
cgctcctgtcatttgattgatcaaggtgattttgccgatgtgacggtcttggaaccaact
ggccaagtgatcaaaaccgaaacggtaaaagagatgatggctaacttttctcaaacaggt
tatgaaggcaaacgacaggtctttattatcaaagactgtgacaaaatgcatgtcaatgct
gcaaatagcctcttgaaatacattgaagagcctcaagggcatacctacatttttttattg
accaatgatgataatcaggtacttccaaccattaaaagtcgaactcaggtgtttcaattt
cctaaaaacgaaacctatctctttcaattagcccaagagcaaggcttgctaaaaagtcaa
gctgatttattggctaaattagctaagaataccgaccagttgaaagacttggcacaaaat
agtaaggtgctggaggtgatggcgcaaacagagcgttttgtctttatttggctgaaagac
cagttgcaggcttacttagctttgaatcgtctggtacaattggcgactgaaaaagaggag
caagatttggttttaactctcttaaccctgcttttggcaagagaacagtcgcaaacaagt
tgtcaacaattggaggctgtctatcaggctaggctcatgtggcaaagcaatgtcaatttc
caaaacacattagaatatatggtgatgtcatga
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