Streptococcus canis: NCTC12191_00414
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Entry
NCTC12191_00414 CDS
T07143
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
scai
Streptococcus canis
Pathway
scai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC12191_00414 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scai03021
]
NCTC12191_00414 (rpoC)
03400 DNA repair and recombination proteins [BR:
scai03400
]
NCTC12191_00414 (rpoC)
Enzymes [BR:
scai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC12191_00414 (rpoC)
Transcription machinery [BR:
scai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC12191_00414 (rpoC)
DNA repair and recombination proteins [BR:
scai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC12191_00414 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Dehydratase_LU
Motif
Other DBs
NCBI-ProteinID:
VEE24290
LinkDB
All DBs
Position
1:complement(431752..435393)
Genome browser
AA seq
1213 aa
AA seq
DB search
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEPKSLLTEREYREKLQEYGHGSFVAKMGAEAIQDLL
KRVDLAAEIAELKEELKSASGQKRIKAVRRLDVLDAFHKSGNKPEWMVLNILPVIPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVAKEYAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDAGREGEGMIFKDKDEAVMAYRNGYAHLHSRVGI
AVDSMPKKPWKDSQRQKIMVTTVGKILFNDIMPEDLPYLQEPNNANLTEGTPDKYFLEPG
QDIQEVIDRLDINVPFKKKNLGNIIAETFKRFRTTETSAFLDRLKDLGYYHSTLAGLTVG
IADIPVIDNKAEIIDAAHHRVEEINKAFRRGLMTDDDRYVAVTTTWREAKEALEKRLIET
QDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFS
THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRAITDGKEVTETL
EERLQGRYTRKSVKHPETGEVLIGADQLITEDMARKIVDAGVEEVTIRSVFTCATRHGVC
RHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE
IFEARNPKGEAVITEVKGNVVEIEEDASTRTKKVYVQGQTGMGEYVVPFTARMKVEVGDE
VNRGAALTEGSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRK
VRVMDPGDTDLLPGTLLDIADFTDANKEIVISGGIPATSRPVLMGITKASLETNSFLSAA
SFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNIEPQAINDIEVIDNA
ELLEETVATTEAK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgtaaatcgttttaaaagtatgcaaatcacattagcctcaccaagtaaggtc
cgttcatggtcgtatggtgaagttaaaaaacctgaaacaatcaactaccgtacattgaaa
ccagaacgtgaaggactctttgacgaagtcatctttggtccaacaaaagactgggaatgt
gcgtgtggtaaatacaaacgtatccgttataaaggtatcgtgtgtgaccgctgtggggtt
gaagtaactcgtgctaaagttcgtcgcgaacgtatggggcacatcgagttaaaggctcct
gtgtcacatatctggtatttcaaagggatcccatcacgtatgggattgactcttgatatg
agtcctcgtgctcttgaggaagttatctactttgcggcttatgtggtcatcgatccaaag
gatacaccgcttgaaccaaaatcattattaacagagcgtgaataccgtgaaaaactgcaa
gagtatggacacggttcatttgtcgctaaaatgggtgcggaagccattcaagatctcttg
aaacgtgtggacttggcagctgaaatcgctgaattaaaagaagagttaaaatctgcttct
ggtcaaaaacgaattaaggcagttcgtcgtttggatgtgcttgatgccttccacaaatct
ggaaataaaccagaatggatggtacttaacatcttgccagttattccaccagatttacgc
ccaatggttcaattagatggtggccgtttcgccgcatctgacttgaatgacttgtaccgt
cgtgtgattaaccgtaacaaccgtttggcacgtttgttggaacttaatgccccaggtatt
atcgttcaaaatgaaaaacggatgcttcaagaagccgttgatgctttgattgataacggt
cgtcgtggtcgtccaatcactggaccaggtagtcgtccattgaaatctttgagccacatg
cttaaagggaaacaaggtcgtttccgtcaaaacttgcttggtaaacgtgtagacttttct
ggccgttccgttatcgccgtaggtccaaccctaaaaatgtaccaatgtggtgtgccacgt
gaaatggctattgagctctttaaaccatttgtcatgcgcgaaattgttgccaaagaatat
gctggtaacgttaaggcagctaagcgtatggttgaacgtggtgacgaacgcatctgggat
atcttagaagaggttatcaaagaacacccagttctccttaaccgtgcaccgacccttcac
agacttggtattcaggcctttgagcccgttctgattgatggtaaggcacttcgtcttcac
ccacttgtgtgtgaggcctacaatgccgacttcgatggagaccaaatggccatccacgtg
ccattgtctgaagaagcacaagctgaagctcgtctcttaatgcttgccgcagagcacatc
ttgaatcctaaagacggtaaacctgttgttaccccatctcaggatatggtgttgggtaat
tattaccttacgatggaagatgctggtcgcgaaggtgaaggcatgatcttcaaggataaa
gacgaagctgtgatggcatatcgtaatggttatgctcacttgcatagtcgtgtgggtatc
gctgttgacagcatgcccaaaaaaccttggaaagatagccaaagacaaaaaatcatggtg
acaactgttggtaagattttgtttaacgacatcatgccagaagaccttccttacctccaa
gagccaaacaatgccaacttgacagaaggaacacctgataaatacttccttgaacctggt
caagatatccaagaagtcatcgatcgcttggacatcaatgtgccattcaagaagaaaaac
cttggtaacatcatcgcagaaaccttcaaacgtttccgtacaacagaaacatcagccttc
cttgaccgcttgaaagaccttggttactaccattcaacccttgctggtttgacagtgggt
atcgctgacattcctgttattgataataaagctgaaatcattgatgctgctcaccatcgt
gttgaagaaatcaataaggctttccgtcgtggtttgatgacagatgatgaccgttatgtt
gccgttacaacaacatggcgtgaagctaaagaagcccttgaaaaacgtctgattgaaaca
caagatcctaagaacccaatcgttatgatgatggactcaggagctcgtggtaacatctct
aacttctcacagcttgcgggtatgcgtggtttgatggctgctcctaacggacgcatcatg
gaacttcctatcttgtcaaacttccgtgaaggtttgagcgttttggaaatgttcttctca
acccacggtgcacgtaaagggatgaccgatacggcccttaaaacagccgactcaggttac
cttactcgtcgtttggttgacgttgcccaagatgttatcattcgtgaagacgactgtggt
actgaccgtggacttcttatccgtgctattacagatggtaaggaagttaccgaaaccctt
gaagaacgtcttcaaggtcgttacacacgtaaatcagtcaaacatcctgaaactggtgaa
gtcttgattggtgctgaccaattaatcactgaagacatggctcgtaagattgttgatgca
ggtgttgaagaagtgaccattcgttctgtctttacctgtgcgacacgtcacggtgtctgc
cgtcattgttatggtatcaaccttgcaactggcgatgccgttgaagtgggtgaagcagtc
ggtactatcgctgcccaatctatcggtgagcctggtactcagcttaccatgcgtaccttc
cacacgggtggtgtagcctcaaatactgacatcacacagggtcttcctcgtatccaagaa
atctttgaagcacgtaaccctaaaggggaagcggtcattactgaagtgaaaggtaatgtc
gttgagattgaagaagatgcctcaacacgtactaagaaagtttacgttcaaggtcaaact
ggcatgggcgaatacgtcgtaccatttacagcacgtatgaaggttgaagtcggcgacgaa
gttaatcgcggagctgctctgacagaaggctctattcaaccgaaacgtcttcttgaagta
cgtgataccttgtccgttgaaacttatcttcttgcagaagtgcaaaaagtttaccgtagc
caaggggtagaaatcggagataaacacgttgaggtaatggttcgccaaatgcttcgtaaa
gttcgtgtgatggatccaggggataccgatcttcttccaggaactctacttgacattgca
gactttaccgatgctaataaagaaattgttatttctggtggcattcctgcgacctctcgt
ccagttcttatgggaattaccaaagcttcacttgaaaccaattccttcttgtcagctgca
tccttccaggaaacaactcgtgtccttacagatgctgcaatccgtggtaaaaaagaccat
cttcttggtcttaaagaaaatgttatcatcggtaaaatcattccagctggtactggtatg
gcacgttaccgtaacatcgaaccacaagctatcaatgatattgaagttattgacaatgct
gagcttttagaagaaacagttgctacaactgaagcaaaataa
DBGET
integrated database retrieval system
