Streptococcus canis: NCTC12191_01420
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Entry
NCTC12191_01420 CDS
T07143
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
scai
Streptococcus canis
Pathway
scai03410
Base excision repair
scai03430
Mismatch repair
scai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12191_01420 (recJ)
03430 Mismatch repair
NCTC12191_01420 (recJ)
03440 Homologous recombination
NCTC12191_01420 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scai03400
]
NCTC12191_01420 (recJ)
DNA repair and recombination proteins [BR:
scai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NCTC12191_01420 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC12191_01420 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC12191_01420 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
VEE25218
LinkDB
All DBs
Position
1:1408107..1410314
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AA seq
735 aa
AA seq
DB search
MIKSKYSWKIEDKKPDDGFFKLAKAKGLTQTAAQLIYERGIRTEEALDDFLVADLSQLHD
PYLLHDMAKAVPRIRQAIEEGERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRF
TDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAISYAQAQGVDVIVTDHHSLPEELPE
AFAIIHPEHPDADYPFKHLAGCGVAFKLATALLENLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLTMLKHTERIGLQELMTLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIEL
LTGFDDQKAQNIALMIKEKNEERKALVQEIFDQAMAMVDDQKPVQVLAQAGWHPGVLGIV
AGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALSGKRELFTAFGGHAGAAGMTLP
LDNLEALSDLLCQFVIERGLDQTAKNTLTIDEGLSLEELSLDTLKSLDKLAPYGMDHPKP
VFYVKDITVSQARTMGQDQSHLKFKVSQGKTSFDVLAFGQGSQIQDFQQATGLELAVTLS
VNHWNGNTSLQFMLVDARVDGVQLLDLRTKTAKIPEGIPTIEEDPNAKVVLINDIPEDFK
SWRTQFANKTFDAIYFKNQINHPYYLTGFGSREQFAKLYKTIYQFPEFDLRHKLTDLSRY
LNIDKLLLIKLIQIFEELAFVTIEDGLMTVNPQAQKREISESHIYQELKELVKFQEIMAL
ASPQEMYDYLVHSKS
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatccaaatatagctggaaaatagaagacaagaagccagatgatggcttcttt
aagctagcaaaggcaaaaggtctgacccagaccgccgctcagttgatttatgagcgaggg
ataaggactgaagaagccttagatgactttctggtagctgatttgtcgcaactgcatgat
ccctatttgctacatgacatggcaaaggctgtcccaaggattcgccaagctattgaagag
ggcgaacggattctcatttacggcgattatgatgctgatggcatgacgtcggcatctatt
gtcaaggaaaccttagacatgatgggggcagagcctttagtttacctccctaaccgtttt
acagatggttatggtcccaatcagagcgtctataaatactttattgagcaggaagctgtg
tccttaattatcacggttgataatggagtagcagggcacgaagcgattagctatgcccaa
gcacagggagttgatgttattgtgactgaccaccatagcctgcctgaagaattgccagag
gcctttgccatcattcaccctgagcatcccgatgctgattatccctttaaacacttagct
ggctgtggcgttgcctttaaattggcaactgctttgctagaaaatttgccaacagactgc
ctagacttggtagccattggaacaattgctgatatggtaagtttgacaggtgaaaaccgt
gtcttagtcaaaaatggcttgaccatgctcaagcatactgagaggatcggtttgcaggaa
ctaatgaccctatcacctattgatttagaacattttaatgaagatgctattggttttcag
attgctccgcaattaaatgctttaggccgcttggatgaccctaatccagccattgagctg
ctgacaggttttgatgaccaaaaagcccaaaatattgccttgatgattaaggaaaaaaat
gaagagcgtaaggccttagtccaagagatttttgatcaagcgatggctatggttgacgat
caaaaacctgttcaagtcttagctcaagccggctggcaccctggtgttctggggattgtc
gctggtcgtatcatggaaactattggacaaacggtagttgtcttgaccattgataatggc
tttgcaaaaggctcggccagaagtttagaagctattaatatttttgaagctttgagtggc
aagcgtgaattatttacagcgtttggggggcatgctggtgcagcaggaatgacccttccc
cttgataacttagaagctctctcagacttgctctgtcagtttgtgatagagcgtggctta
gatcagactgccaaaaatacactgactattgatgaaggtttgtcattggaggaacttagt
cttgatactttaaagagtttagataaattagctccttatggtatggatcatcccaagccg
gtcttttatgtcaaggacataacagttagccaagcgcgtaccatgggacaggaccagagt
catcttaaattcaaagtcagtcagggcaaaacttcctttgatgtactggcttttggtcaa
ggaagccagatacaagactttcaacaagctactggtttagaattagcagtgaccttatct
gtcaaccattggaatgggaacacgagtctccaattcatgttagtagatgctcgtgttgat
ggagtacaacttcttgatttaaggacaaaaacggcgaaaattcctgaaggtattccgact
attgaagaagatccaaatgccaaagtcgttctgattaatgacattcctgaagatttcaaa
agctggcgtacccagttcgctaataagacttttgacgctatttattttaaaaatcagatt
aaccatccttactacctaacgggatttggtagtcgtgaacagtttgctaaactctacaaa
accatctaccaatttcccgaatttgatttgcgtcataagttgactgacttgagtcgctac
ctaaacattgacaaactcttattgattaagctcattcagatttttgaagagttagctttt
gtgacgattgaagatggattgatgacggttaacccacaagcgcaaaaacgagagatttca
gagagtcacatttaccaagagttaaaagaattggtgaagtttcaggaaatcatggcattg
gctagcccgcaggagatgtacgattatttggtccattccaaatcataa
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integrated database retrieval system
