Streptomyces camelliae: O1G22_09535
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Entry
O1G22_09535 CDS
T10340
Name
(GenBank) polysaccharide lyase family protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
scaj Streptomyces camelliae
Brite
KEGG Orthology (KO) [BR:
scaj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
O1G22_09535
Enzymes [BR:
scaj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
O1G22_09535
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
PEGA
DUF4340
DUF4278
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
WBO63047
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Position
2103479..2105158
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AA seq
559 aa
AA seq
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MSGSSNSAVTRRAFVVTAAAATGTAALAGPLAATASAASFGWSDDGSNYVVDTGASLVFK
VSKTNGDLTSLVYKGTEYQGYGGKNSHVESGLGTSTVTLAQSGSTILISVAYGTLRHYYA
ARSGENNIYLWTNKADSSVTATRYIVRVKAGLFLNDEPDSYTYTTSTVEASDVFAKSDGQ
TRSKHYSRHRVIDYDYIGWTTGSVGLWIVRSNHEKASGGPFYRSLLRHQSADGGGLYEIL
YYGENQTEAERFGLQGPYVIAFTDGGAPSSSLYHGTLTTPWADSLGISGYVADGGRGRVA
GVGISGRDTAYTYTVGLANSAAQYWGTARASDGWFSVSRILPGAYTLTVYKGELAVYSTQ
VTVSAGATTTLNTITVPSSNDPSNASAIWRIGNWDGTPSGFKNADLMTYAHPSDVRASSW
TGNVVIGSGSETSAFPCYLWKDVNGGLLVYFRLTAAQAAAAHTLRIGVTTAYANGRPQIT
VNGNWTSAIPSPPTQPSTRSLTVGSYRGNNYTFSYSVPATAWLTDTSQYNVLKIDIVSGS
GTTGYLSAGTAIDAIDLLA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatcctcgaacagcgcggtcacgcgccgcgccttcgtcgtcaccgccgcggcc
gccaccggtacggccgccctcgccggcccgctcgcggccaccgcgtcggcggcgagcttc
ggctggagcgacgacggctccaactacgtcgtcgacaccggcgcgagcctcgtcttcaag
gtcagcaagaccaacggcgacctgacctcgctggtgtacaagggcaccgagtaccagggc
tacggcggcaagaactcccacgtcgagtccggcctcggcacctccaccgtcaccctggcc
cagtccggctcgaccatcctgatctccgtcgcctacggcacactgcggcattactacgcg
gcccgcagcggcgagaacaacatctacctgtggaccaacaaggccgactcctcggtcacc
gccacccggtacatcgtgcgcgtgaaggcgggcctgttcctcaacgacgaaccggactcc
tacacctacaccaccagcaccgtcgaggcctcggacgtcttcgccaagtccgacgggcag
acccgctccaagcactactcccgccaccgggtcatcgactacgactacatcggctggacc
accggcagcgtcggcctgtggatcgtccgcagcaaccacgagaaggcctccggcggcccc
ttctaccgctcgctgctgcgccaccagagcgccgacggcggcggactgtacgagatcctc
tactacggcgagaaccagacagaggccgagcgcttcggcctccagggcccgtacgtcatc
gccttcaccgacggcggggcaccctcgtcctcgctgtaccacggcaccctcaccacgccc
tgggccgactcgctcggcatctccgggtacgtcgccgacggcggccggggccgggtggcc
ggcgtcggcatcagcggacgggacacggcgtacacgtacacggtcgggctggccaactcg
gcggcgcagtactggggtacggcgcgggcgtcggacggctggttctcggtgtccaggatc
ctgccgggtgcatacacgctgacggtctacaagggcgagttggctgtatacagtacacag
gtgaccgtatccgcgggcgcgacgaccaccctcaacacgatcaccgtcccgtcgtccaac
gacccgtcgaacgcgagcgccatctggcgcatcggcaactgggacggcacaccgagcggg
ttcaagaacgcggatctgatgacgtacgcgcacccctcggacgtgcgggcctcctcctgg
accgggaacgtggtgatcggaagcggttccgagacctccgccttcccgtgctacctgtgg
aaggacgtcaacggcggcctgctcgtctacttcaggctcaccgccgcccaggccgccgcc
gcgcacaccctgcggatcggcgtgaccaccgcctacgccaacggccggccgcagatcacg
gtcaacggcaactggacctcggcgatcccctccccgcccacccagccgagcacccggtcc
ctgacggtcggctcgtaccggggcaacaactacacgttctcctacagcgtcccggccacc
gcgtggctcacggacaccagccagtacaacgtgctgaagatcgacatcgtgagcggttcg
gggacgacgggctatctcagcgccggcacggcgatcgacgcgatcgacctgcttgcctga
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