KEGG   Streptomyces camelliae: O1G22_14420
Entry
O1G22_14420       CDS       T10340                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
scaj  Streptomyces camelliae
Brite
KEGG Orthology (KO) [BR:scaj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scaj03021]
    O1G22_14420
Transcription machinery [BR:scaj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     O1G22_14420
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 PF0610-like_N DUF7343 Sigma70_ECF MarR_2 NirdL-like_HTH HTH_24 IF2_N MarR HTH_3 HTH_Crp_2 GerE HTH_AraC HTH_ParB
Other DBs
NCBI-ProteinID: WBO63940
UniProt: A0ABY7P317
LinkDB
Position
3206667..3207752
AA seq 361 aa
MRDEERGTRELPTGDGGAPWSAETPGASPRDGSRRMADGIEGIPEQARPHPEDHSARVGG
DGSAQGAPTEAPRAGAKARGRATGGTMSEHERYAENDALGAEAVQAAQHGPQDRSGARAM
FVELRKLNDGSPEYAELRNQLVRMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDR
FDPERGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLALTTATAELSQLHGRSP
TVHELAEKLAISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGAEDEALEGVEYR
ESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQLREKLLVE
E
NT seq 1086 nt   +upstreamnt  +downstreamnt
gtgcgggacgaagagcgcggcacacgggagctgccgaccggggacgggggtgccccctgg
tcagccgagacccctggggcgagcccccgggacggttcccggcgcatggcggacggcatc
gagggcatccccgagcaggcgagaccgcacccggaggaccactccgcgcgggtcggcggt
gacggttccgcgcagggcgcgcccacggaggcaccccgcgcgggggcgaaggctcgggga
agggctacgggcgggacgatgagcgagcacgagcgatacgccgagaacgacgcgctgggc
gcggaggccgtgcaggcggcacagcacggcccccaggaccgcagcggggcgcgggcgatg
ttcgtcgagctgcgcaagctgaacgacggcagcccggagtacgcggagctgcgcaatcag
ctggtccgtatgcatctgccgctcgtggagcacctggcacgccgcttccgcaaccgcggc
gagccgctggacgacctcacccaggtcgccacgatcggcctgatcaagtccgtcgaccgg
ttcgacccggagcgcggcgtggagttctccacgtacgccaccccgaccgtggtcggcgag
atcaagcggcacttccgcgacaagggctgggcggtccgtgtgccgcgccggctgcaggag
ctgaggctggcgctgaccacggcgacggccgagctgtcccagctgcacggccgctccccc
acggtgcacgagctggccgagaagctcgccatctccgaggaggaggtcctggagggcctg
gagtccgccaacgcgtactccacgctgtccctggacgtccccgacaccgacgacgagtcc
ccggcggtcgccgacaccctcggcgcggaggacgaggcgctggagggggtggagtaccgg
gagtcgctgaagccgctgctggaggatctgccgccgcgcgagaagcggatcctgctgctg
cgcttcttcgggaacatgacccagtcgcagatcgcgcaggaggtcggcatctcccagatg
cacgtctcccgcctgctggcccgcaccctggcccagctgcgggagaagctcctcgtggag
gagtaa

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