Streptomyces camelliae: O1G22_18125
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Entry
O1G22_18125 CDS
T10340
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
scaj Streptomyces camelliae
Brite
KEGG Orthology (KO) [BR:
scaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scaj03016
]
O1G22_18125
Enzymes [BR:
scaj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
O1G22_18125
Transfer RNA biogenesis [BR:
scaj03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
O1G22_18125
Prokaryotic type
tRNA splicing ligases
O1G22_18125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WBO64617
UniProt:
A0ABY7P4G7
LinkDB
All DBs
Position
complement(3984659..3985852)
Genome browser
AA seq
397 aa
AA seq
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MSYVEMPGAKVPIRMWTDPATVEDVALRQLQNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMQGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSRIEQAIPVGRGMHEDPVEPG
DFHGLATGGWDDFWGRFDGVAEAVHFRKGRAAGQIGTLGSGNHFIELCTSEDGSVWLMLH
SGSRNIGKELAEHHIGVAQKLPHNQGLVDRDLAVFVSDTPQMAAYRNDLFWAQEYAKYNR
TLMMALLKDVIRKEFKKAKPTFEPEISCHHNYVSEERYDGMDLLVTRKGAIRAGSGEYGI
IPGSMGTGSYIVKGLGNEKAFNSASHGAGRKMSRNAAKKRFTTKDLEDQTRGVECRKDSG
VVDEIPGAYKSIDQVIDQQRDLVQVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtggagatgccgggcgcgaaggtaccgatccggatgtggacggaccccgcg
acggtcgaggacgtggccctgcgccagctgcagaacgtggcgaccctgccctggatcaag
ggcctcgccgtcatgccggacgtgcactacggcaagggtgcgacggtcggctcggtcatc
gcgatgcagggtgccgtgtgcccggcggcggtcggggtggacatcggctgcgggatgtcg
gcggtgaagacgtcgctgacggccaatgacctgccgggggatctgtcgcggctgcggtcg
aggatcgagcaggcgattccggtggggcgggggatgcatgaggatccggtggagccgggg
gattttcatgggctggctaccggtgggtgggatgacttctgggggcggttcgacggggtt
gcggaagcggtgcatttccgtaaggggcgagcggccggacaaatagggacacttgggtcg
ggcaaccacttcattgaattgtgtacgagtgaagatggttcggtttggctcatgctccac
tccggctcccggaacatcggcaaggaactcgccgagcaccacatcggcgtggcccagaag
ctcccgcacaaccagggcctggtcgaccgggacttggcggtcttcgtctcggacaccccg
cagatggcggcctaccgcaacgacctgttctgggcgcaggaatacgccaagtacaaccgc
acgctgatgatggcgctcctgaaggacgtgatccgcaaggagttcaagaaggccaagccg
accttcgagccggagatctcctgccaccacaactacgtttcggaagagcggtacgacggc
atggacctgctcgtcacccgcaagggagcgatccgagccggctccggcgagtacgggatc
atcccgggctccatgggcacggggtcgtacatcgtgaagggcctcgggaacgagaaggcc
ttcaactcggcctcgcacggcgcgggtcggaagatgagccggaacgcggcgaagaagcgt
ttcacgacgaaggacctggaggaccagacccggggcgtggagtgccgcaaggactccggc
gtcgtcgacgagatcccgggcgcctacaagtccatcgaccaggtcatcgaccagcagcgg
gacttggtgcaggtcgtggccaagctgaagcaggtcgtctgcgtgaagggctga
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