Streptomyces camelliae: O1G22_20070
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Entry
O1G22_20070 CDS
T10340
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
scaj Streptomyces camelliae
Pathway
scaj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scaj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O1G22_20070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scaj03021
]
O1G22_20070
03400 DNA repair and recombination proteins [BR:
scaj03400
]
O1G22_20070
Enzymes [BR:
scaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O1G22_20070
Transcription machinery [BR:
scaj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O1G22_20070
DNA repair and recombination proteins [BR:
scaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O1G22_20070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WBO64964
LinkDB
All DBs
Position
4402181..4403203
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRVDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLAALNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPVD
AALAADLALPIEELELTVRSYNCLKREGVHSVGELMARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAVDAFGADDNGSTGFMGTEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatcgctcagcgtccgtcactgaccgaagaggtcgtcgacgagttccggtcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctgcgccgt
accctcctctcctcgatccccggcgctgctgtcaccagcatccgcgtcgacggcgtcctg
catgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
cccgacctcgtcctcgccgcgctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggttacgtctccgccgtgcagaacaagcaggtgggccaggagatcggc
cgtatcccggtcgactcgatctactcgccggttctgaaggtcacgtacaaggtcgaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gcgatgcgtccgcgtgacgccatggcctccgcgggcaagacgctggtcgagctgttcggt
ctcgcccgcgagctgaacatcgacgccgagggcatcgacatgggcccgtcccccgtggac
gccgccctggccgccgacctcgcgctgccgatcgaggagctggagctcacggtccgctcg
tacaactgcctcaagcgtgagggcgtccactcggtgggtgagctcatggctcgttccgag
gcggacctgctggacatccgcaacttcggtgcgaagtccatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgacccgaccgccgcc
gtggacgccttcggcgcggacgacaacggcagcacgggtttcatggggaccgagcagtac
tga
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