Streptomyces camelliae: O1G22_27140
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Entry
O1G22_27140 CDS
T10340
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
scaj Streptomyces camelliae
Pathway
scaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O1G22_27140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scaj03400
]
O1G22_27140
Enzymes [BR:
scaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
O1G22_27140
DNA repair and recombination proteins [BR:
scaj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O1G22_27140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
PIF1
Helicase_RecD
AAA_16
NPHP3_N
PhoH
DEAD
nSTAND3
TraI_hel_assoc_N
HTH_IclR
UvrD-helicase
ABC_tran
AAA
UvrD_C
DUF87
Motif
Other DBs
NCBI-ProteinID:
WBO66220
LinkDB
All DBs
Position
5926162..5928435
Genome browser
AA seq
757 aa
AA seq
DB search
MAQHAGTQTGERRLATLEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGALLGAQVG
ESLRMEGRWGSHPQYGKQFHVENYTTLLPATVQGIRRYLGSGLVKGIGPVFADRITQHFG
LDTLRIIEEEPKRLIEVPGLGPKRTKKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIYK
KYGDASISIVKNHPYRLAADVWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQSADQ
GNCFLPEERLIADAVKLLQVDTGLVIECLAELAAQPEEEGADPGVVREKVPGPDGDRDDP
VTAVYLVPFHRAELSLSAQLLRLLRTEQDRMPGFQDVDWDKALGWLKTRTGADLAPEQEA
AVKLALSQKVAVLTGGPGCGKSFTVRSIVELARAKRAKVLLAAPTGRAAKRLAELTGAEA
STVHRLLELKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDV
DQLPSVGAGEVLRDLLADGSPIPAVRLTRVFRQAQQSGVVTNAHRINAGQHPLTDGLKDF
FLFVEDETEEAGRLTVDVAARRIPAKFGLDPRRDVQVLAPMHRGPAGAGVLNGLLQQAIT
PGRPDLPEKRFGGRVFRVGDKVTQIRNNYEKGENGVFNGTVGVVTSLDPVDQKLTVLTDE
DEEVPYEFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKQL
VVLVGSRKAIGQAVRTVSAGRRCTALDFRLIESHREK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcatgcggggacccagaccggagagcgacggctcgccacgctcgaaggcgtg
ctggaacgcatcacgtacgccaacgaggagaacggctacacggtcgcccgggtcgacacg
ggcagaggcgcgggcgatctcctcacggtcgtcggcgcgctgctcggtgcccaggtgggg
gagtcgctgcgcatggagggtcgctggggctcgcacccgcagtacggcaagcagttccac
gtcgagaactacacgaccctcctccccgccaccgtccagggcatccggcgttacctcggc
tcagggctcgtgaaagggatcggccccgtcttcgccgaccggatcacccagcacttcggg
ctggacaccctccggatcatcgaggaagaacccaagcggctcatcgaagtccccggcctc
gggcccaagcggaccaagaagatcgccgacgcctgggaggagcagaaggcgatcaaggag
gtcatgctcttcctccagaccgtcgaggtgtccacctccatcgccgtgcggatctacaag
aagtacggcgacgcgtcgatctccatcgtcaagaatcacccctaccgactcgccgccgac
gtctggggcatcggcttcctgaccgccgacaagatcgcccagtccgtcggcatcccgcac
gacagcccggagagagtcaaggccggccttcagtacgcgctgtcccagtccgccgaccag
ggcaactgcttcctgcccgaggagcggctcatcgccgacgcggtcaagctgctccaggtc
gacaccgggctggtcatcgagtgcctcgccgagctggccgcccagccggaagaggaggga
gcggacccgggcgtcgtacgggagaaggtccccggaccggacggtgaccgggacgacccg
gtcaccgccgtctacctggtccccttccaccgcgccgaactctccctctccgcccagctc
ctgcgtctcctgcgaaccgagcaggaccgcatgcccggcttccaggacgtcgactgggac
aaggccctcggctggctgaagacgcgtaccggcgccgatctcgccccggagcaggaggca
gcggtcaagctggcgctcagccagaaggtcgccgtgctcaccggcgggcccggctgcgga
aagtccttcacggtgcgttcgatcgtggagctggcccgcgccaagcgggccaaggtgctg
ctggccgcgccgaccgggcgggccgccaagcggctggccgagctgaccggtgccgaggcc
tccacggtgcaccggctgctggagctcaagccgggcggggatgccgcgtatgaccgggac
cggccgctggacgccgacctggtcgtggtcgacgaggcctccatgctcgacctcctcctc
gccaacaagctcgtgaaagccgtaccgcccggagcgcatctcctcttcgtcggggacgtc
gaccagcttcccagcgtcggcgcgggggaagtcctccgggaccttctcgccgacggcagt
cccatccccgccgtacggctcacgcgcgtcttccggcaggcccagcagtccggtgtcgtc
accaacgcgcaccgcatcaacgcggggcagcatccgctcaccgacgggctcaaggatttc
ttcctcttcgtcgaggacgagacggaggaggccgggcggctcaccgtggacgtggcggcg
cggcggattccggccaagttcgggctcgatccgcggcgggacgtccaagtgctcgcgccg
atgcaccgggggcctgccggggccggggtgctcaacggtctgctccagcaggccatcacc
cccggccggcccgatctgcccgagaagcggttcggcgggcgggtcttccgtgtcggggac
aaggtgacccagatccgtaacaattatgagaaaggggagaacggcgtcttcaacggcacc
gtcggcgtcgtcacctcgctcgatccggtcgaccagaagctgacggtgctgacggacgag
gacgaggaggttccgtacgaattcgacgaactggacgaactggcgcacgcgtacgcggtg
accattcaccgctcgcagggaagtgaatatcccgcggtggtgattcccgtcacgaccggg
gcatggatgatgctccagcggaacctgctgtacaccgccgtgacccgggccaaacagctg
gtcgtcctcgtcggttcacgcaaggcgatcgggcaggcggtgcgcacggtgtccgccgga
cggcggtgtacggccctggacttcaggctcatcgagtcccatcgcgaaaaatga
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