Streptomyces camelliae: O1G22_40050
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Entry
O1G22_40050 CDS
T10340
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scaj Streptomyces camelliae
Pathway
scaj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
O1G22_40050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scaj03400
]
O1G22_40050
Enzymes [BR:
scaj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
O1G22_40050
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
O1G22_40050
DNA repair and recombination proteins [BR:
scaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
O1G22_40050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Zn_ribbon_IS1595
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Zn_ribbon_TFIIB
Phage_zn_bind_2
Motif
Other DBs
NCBI-ProteinID:
WBO68572
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All DBs
Position
8717363..8718145
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AA seq
260 aa
AA seq
DB search
MPELPDVEGYREVLNTCGRGRRVRRVDVRDTGVLRGVGARHLRREVEGQRLGRPWRHGKL
LVVPFGDGPALVWHFGMTGELVCTGADDPLQTHDRVVLALDDERQLRYRDQRKLQGVRLC
PDQRALERLLARLGPDALEMDRPDFLELLAGRRGAVKSVLMDQSLIAGLGNLLSDEILWR
ARVAPRRPARDLDESEARHVFTAMRRVLATANRAGRVPPRRTWLTGRRDDAEPACPRCGE
RLRSRRVSGRRTVWCAHCQH
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttgcccgacgtggagggctaccgcgaggtgctgaacacctgtggccgcggg
cggcgcgtccgccgtgtcgacgtacgggacacgggcgtgctgcgcggggtcggcgcgcga
cacctgcgacgggaggtggagggacagcggctgggccgcccatggcggcacggcaagctg
ctggtggtcccgttcggcgacggcccggccctcgtctggcacttcggcatgaccggtgag
ctggtgtgcaccggcgcggacgacccgcttcagacccacgaccgggtcgtcctggccctc
gacgacgaacggcagctgcgctaccgcgaccagcgcaaactccagggcgtccggctctgc
ccggaccagcgggcgctggagcggctgctggcacggctgggccccgacgccctggagatg
gaccgccccgacttcctggagctgctcgccgggcggcggggcgccgtcaagagcgtgctg
atggaccagtccctcatcgccggtctgggtaatctgctcagcgacgagatcctctggcgg
gcccgcgtggctccccggcgcccggcgcgggacctggacgaatccgaggcgcgtcacgtg
ttcacggcgatgcgccgcgtgctcgccaccgccaaccgggccggacgcgtaccgccgcgc
cgtacctggctcaccggccgtcgcgacgacgccgaaccggcctgcccccgctgcggcgaa
cgactgcggtcccgccgcgtctccggccgccgcaccgtctggtgcgcgcactgccagcac
tga
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