Streptomyces californicus: I6J39_01510
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Entry
I6J39_01510 CDS
T07611
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scal03021
]
I6J39_01510
Transcription machinery [BR:
scal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6J39_01510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
DUF7343
HTH_10
HTH_23
MarR
HTH_3
HTH_37
HTH_24
KORA
Ub-Mut7C
GerE
Motif
Other DBs
NCBI-ProteinID:
QRV26112
LinkDB
All DBs
Position
314773..315663
Genome browser
AA seq
296 aa
AA seq
DB search
MTVQTSQTAQSVQTAGTDVTGTAEDLPWIEDAGKVAPMDARRLSRLFFDRLQVLEEGTHE
YQYARNTLIEMNLSLVRFAANRFRNRGSGDMEDIVQVGTIGLIKAIDRFDLSREVEFTSF
AVPYIVGEIKRFFRDTSWAVHVPRRLQELRVDLAKAKEALAADLDRDPTVKELAEALGIE
ESEVTEGIVASNGYTAGSLDMPTDTAESGPGQSGARTFADVLGGLDPAMESVENLHALAP
LLSELDERERRIIDMRFGQEMTQAQIGAELGISQMHVSRLLSRMLGRLRDGMLVQE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgcagacctcgcagaccgcacagtccgtgcagacggcgggtacggacgtgacg
ggcaccgccgaggatcttccctggatcgaggatgccgggaaggtcgccccgatggacgcg
cgccgcctctcgcgtctcttcttcgaccggctccaggtcctggaggaggggacgcacgag
taccagtacgcgcgcaacaccctcatcgagatgaacctgtccctggtccggttcgccgcc
aaccgcttccgcaaccggggcagcggtgacatggaggacatcgtccaggtcggcaccatc
gggctgatcaaggcgatcgaccgcttcgacctctcgcgggaggtcgagttcacgtcgttc
gccgtgccgtacatcgtcggggagatcaagcgcttcttccgtgacacgagctgggcggtg
cacgtgccgcgccgcctccaggagctgcgggtcgacctcgccaaggcgaaggaggcgctg
gccgccgacctcgaccgggaccccacggtcaaggagctggcggaagccctgggcatcgag
gagtccgaggtcaccgagggcatcgtcgcctccaacggctacacggcgggctccctggac
atgccgaccgacacggcggagagcgggcccggtcagagcggcgcgcggaccttcgccgat
gtgctgggcggcctcgaccccgcgatggagagcgtggagaacctgcacgccctcgctccc
ctgctgagcgagctcgacgagcgggagcgccggatcatcgacatgcgcttcggccaggag
atgacccaggcccagatcggcgccgaactgggcatctcgcagatgcacgtgtcccggctg
ctgagccggatgctcggccggctgcgcgacgggatgctcgtccaggagtga
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