Streptomyces californicus: I6J39_02225
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Entry
I6J39_02225 CDS
T07611
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
scal
Streptomyces californicus
Pathway
scal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I6J39_02225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_02225
Enzymes [BR:
scal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
I6J39_02225
DNA repair and recombination proteins [BR:
scal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I6J39_02225
Prokaryotic type
I6J39_02225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
QRV26238
LinkDB
All DBs
Position
470880..471557
Genome browser
AA seq
225 aa
AA seq
DB search
MAARPLKEIIEPGWADALEPVAERIAAMGDFLRAEIAAGRTYLPSGAHVLRAFQQPFEEV
RVLVVGQDPYPTPGHAIGLSFAVAPDVRPLPGSLENIFRELHGDLGLPRPSNGDLTPWTR
QGVLLLNRALTTAPRRPAAHRGKGWEEVTEQAIKALVARGTPLVSVLWGRDARNLRPLLG
DYPAIESAHPSPMSADRGFFGSRPFSRVNELLERQGAQPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcacgaccgttgaaagagatcatcgagccgggatgggccgacgccctcgaaccc
gtcgccgaacgcatcgccgctatgggcgacttcctccgcgcggagatcgccgcgggacgc
acgtacctgccctccggggctcatgtgctgcgcgcgttccagcagcccttcgaggaggtg
agagtgctggtcgtgggccaggacccgtaccccacgccggggcacgcgatcgggctgagc
ttcgcggtggcccccgacgtacggccgctgccgggcagcctggagaacatcttccgggag
ctgcacggggatctgggactgccccggccgtccaacggcgacctcacgccgtggacccgg
cagggggtgctgctgctcaacagggcgctgaccaccgcgcccaggcggccggccgcccac
cggggcaaggggtgggaagaggtgaccgagcaggcgatcaaggcgctggtggcccggggc
acccccctcgtctcggtcctgtgggggcgtgacgcccgcaatctccgtccgctgctgggc
gactaccccgcgatcgagtcggcgcacccctccccgatgtccgcggaccggggcttcttc
ggctcgcggccgttcagccgcgtcaacgaactgctggagcgccagggcgcgcagccggtg
gactggcgacttccgtga
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