Streptomyces californicus: I6J39_03450
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Entry
I6J39_03450 CDS
T07611
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_03450
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I6J39_03450
Archaeal homologous recombinant proteins
I6J39_03450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QRV26450
LinkDB
All DBs
Position
complement(751776..752945)
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AA seq
389 aa
AA seq
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MRLLHTSDWHLGRSFHRVPLLDAQSAYLDHLVATVREREVDAVLVAGDVYDRAVPPLTAV
ELFDRALHRLAAEGVPTVMISGNHDSARRLGVGAGLFERAGIHLRTDPENCATPVVLADD
HGDVAFYGLPYLEPALVKDALGAAKAGHEAVLTAAMDRVRADLATRPAGTRSVVLAHAFV
AGGEPSDSERDITVGGVAAVPAGVFDGVDYAALGHLHGSQRVTARVRYSGSPLAYSFSEA
DHRKTMWLIDLDGDGDIAAEERIDCPVERPLARLRGRLDTLLEDPALDRHEHAWVEATLT
DPVRPADPMARLTRRFPHTLSLVFDPERPPDDPGATYAQRLKGRDDHQIAEDFVAHVRGG
SGPNDLERTVLRAAFDDVRVDGTVREVSR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcctgcacacctcggactggcatctgggccggtccttccaccgcgtccccctg
ctcgacgcccagtccgcctacctcgaccacctcgtggcgaccgtccgggagcgcgaggtg
gacgcggtcctcgtcgccggcgacgtctacgaccgggccgtcccgccgctcaccgccgtc
gagctgttcgaccgggcgctgcaccggctcgccgccgaaggcgtgcccaccgtcatgatc
tccggcaaccacgactcggcccgccggctcggcgtcggcgcgggcctcttcgaacgggcc
ggcatccatctgcggaccgaccccgagaactgcgccaccccggtcgtcctcgccgacgac
cacggggacgtggcgttctacgggctgccctacctggaaccggccctggtcaaggacgcc
ctgggggccgcgaaggccggccacgaggcggtcctcaccgccgccatggaccgggtccgc
gccgacctcgccacccgtcccgccgggacccgctccgtcgtcctcgcccacgccttcgtg
gcgggcggcgagcccagcgacagcgaacgcgacatcaccgtcggcggggtcgccgccgtc
cccgccggggtcttcgacggcgtcgactacgcggccctgggacatctgcacggctcccag
cgggtcaccgcccgggtccgctactccggctccccgctcgcgtactccttctccgaggca
gaccaccgcaagacgatgtggctgatcgacctcgacggcgacggggacatcgccgccgag
gagcggatcgactgccccgtggagcgcccccttgcccgcctccgcggccgtctcgacacg
ctgctggaggaccccgccctggaccgccacgagcacgcctgggtcgaggcgaccctcacc
gaccccgtgcgccccgccgacccgatggcccggctcacccggcgcttcccccacaccctc
agcctcgtcttcgaccccgagcggccgccggacgaccccggcgccacctacgcccagcgg
ctgaagggccgcgacgaccaccagatcgccgaggacttcgtcgcccacgtccgcggcggc
agcggcccgaacgacctcgaacgcaccgtgctgcgcgccgcgttcgacgacgtacgggtg
gacgggaccgtgcgcgaggtgtcccggtga
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