Streptomyces californicus: I6J39_03615
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Entry
I6J39_03615 CDS
T07611
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
scal
Streptomyces californicus
Pathway
scal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I6J39_03615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_03615
Enzymes [BR:
scal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
I6J39_03615
DNA repair and recombination proteins [BR:
scal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I6J39_03615
Prokaryotic type
I6J39_03615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QRV26475
LinkDB
All DBs
Position
complement(785851..786540)
Genome browser
AA seq
229 aa
AA seq
DB search
MDVTDIDLLPESWRGVLGEELQKPYVKELADFVEEERAKGPVYPPREQVFAALDATPYDK
VKVLVLGQDPYHGEGQGHGLCFSVRPGVRTPPSLRNIYKEMHQELGLPIPDNGYLMPWAE
QGVLLLNAVLTVRGGEANSHKNKGWEKITDAVIRAVADRPDPAVFVLWGNYAQKKLPLID
EERHIVVKGAHPSPLSAKKFFGSRPFTQINEAVAAQGHQPIDWRIPDLG
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtgaccgatatcgacctgctgcccgagtcctggcgcggtgtcctcggcgaagaa
ctgcagaagccgtacgtcaaggagctggcggacttcgtcgaggaggagcgggcgaagggg
cccgtgtacccgccgcgcgagcaggtcttcgccgccctggacgccactccgtacgacaag
gtgaaggtcctggtcctcggccaggacccgtaccacggcgagggccagggccacggcctg
tgcttctccgtgcggcccggcgtcaggacgcccccgtcgctgcgcaacatctacaaggag
atgcaccaggagctcgggctgccgatcccggacaacggctatctgatgccctgggccgag
cagggcgtcctcctgctcaacgcggtgctcaccgtccggggcggcgaggccaactcccac
aagaacaagggatgggagaagatcaccgacgccgtgatccgcgccgtcgccgaccggccc
gacccggcggtcttcgtgctctggggcaactacgcgcagaagaagctgccgctgatcgac
gaggagcgccacatcgtggtgaagggcgcccacccctccccgctctccgccaagaagttc
ttcggctcccgccccttcacgcagatcaacgaggccgtggccgcccaggggcaccagccg
atcgactggcgcatccccgacctcggctga
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