Streptomyces californicus: I6J39_04470
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Entry
I6J39_04470 CDS
T07611
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
scal
Streptomyces californicus
Pathway
scal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I6J39_04470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_04470
Enzymes [BR:
scal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6J39_04470
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I6J39_04470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
CaATP_NAI
Motif
Other DBs
NCBI-ProteinID:
QRV26625
LinkDB
All DBs
Position
complement(993662..995806)
Genome browser
AA seq
714 aa
AA seq
DB search
MSSENEQSAEPGAGPPEQLALIRETVRRAKVPRAKPRTWRGAALARELPVARVLVNKGVL
HLDQFFDYAVPEELDADARPGVRVRVRFGAGGRNVQGGRREGGGLIDGFIVERRADSDYR
GALAALASVVSPEPVLGPDLLALCRAVADRYAGSLADVVQLAVPPRNGRAESRPSPEPLP
PPPAPPPGSWERYAQGPAFLRALAEGGAPRAVWTALPGPHWPAEIAGAVAATLSSGRGAL
VVVPDGRAAARVDAALTEALGTGRHALLTAESGPEKRYRQWLAVRRGSVRAVVGTRAAMF
APLRDLGLVVVWDDGDSSHSDDNAPFPHVREVLELRATQGRCGFLLGGTSCTVEAAQLVE
SGWALPLLADRERLRRAAPLIRTVGDGELARDGAARSARLPSLAWGAVRDGLRSGPVLVQ
VPRRGYAPRLACERCRTPARCRHCAGPLQAPDQRDLDCAWCGRPEGAWQCAECGSFRLRA
QIVGARRTAEELGRAFPAVPVRTSGRDHVLDAVPGAPALVVSTPGAEPVAEGGYAAALLL
DGWAMLGRPDLRAGEEALRRWTAAAALVRGQDEGGTVVIVAEPTERAVQALVRWDPAGFA
RRELAERAELGFPPVSRMASVTGPVDAPAAFLAGAGLPPEAEILGPVPVPSAEPGRPRRP
GDAPPGESWERALVRVVPGRGAALARALKTALAARMAKGAADPVRIRIDPPDIG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcgagaacgagcagtccgccgagcccggagccgggccgccggaacagcttgcg
ctgatccgggagaccgtccgccgggcgaaggtgccgcgcgccaagccgcggacctggcgc
ggcgcggccctcgcccgcgagcttcccgtcgcccgcgtcctggtcaacaagggcgtgctc
cacctcgaccagttcttcgactacgcggtccccgaggagctggacgccgacgcccggccc
ggcgtccgggtccgggtccggttcggcgccggggggcgcaacgtccagggcgggcggcgc
gagggcggcgggctgatcgacggcttcatcgtcgagcgccgcgccgactccgactaccgg
ggggcgctggccgccctcgcctcggtggtctccccggagccggtcctcgggcccgacctg
ctcgccctgtgccgcgcggtcgccgaccggtacgcgggcagcctggccgacgtcgtgcag
ctcgccgtgccgccccgcaacgggcgcgccgagtccaggccgtccccggagccgctgccg
ccgcccccggcgccgccgccgggctcctgggagcggtacgcccaggggccggccttcctg
cgcgcgctggccgagggcggggcgccgcgcgcggtgtggaccgccctgcccggaccgcac
tggcccgccgagatcgccggggccgtcgcggcgacgctctcctccgggcgcggcgccctc
gtcgtcgtcccggacggccgggccgccgcccgggtcgacgcggcgctgaccgaagcgctc
ggcacgggccggcacgccctgctgaccgccgagtccggccccgagaagcgctaccgccag
tggctcgcggtgcgccggggctcggtgcgggcggtcgtgggcacccgggccgccatgttc
gctcccctccgcgacctcgggctcgtcgtcgtctgggacgacggcgactccagccacagc
gacgacaacgcccccttcccgcacgtccgcgaggtcctggaactgcgcgcgacccagggc
cgctgcggcttcctgctcggcgggacgagctgcacggtggaggccgcccagctcgtggag
agcggctgggcactgcccctcctcgccgaccgcgagcggctgcgccgggccgcccccctg
atccgtacggtcggggacggcgagctggccagggacggggccgcccgctcggcccggctg
cccagcctcgcctggggtgcggtgcgcgacgggctgcgcagcggtccggtgctggtccag
gtgccccgccgcggctacgccccccgcctcgcctgcgaacgctgccgcacgcccgcccgc
tgccggcactgcgccggccccctccaggcgccggaccagcgcgatctggactgcgcctgg
tgcgggcggcccgagggggcctggcagtgcgcggagtgcgggtccttccggctgcgcgcc
cagatcgtcggcgcccgccgcacggcggaggagctgggccgggcctttcccgccgtgccc
gtccgcacctcggggcgcgaccacgtcctggacgcggtgcccggcgccccggccctggtc
gtctccacgccgggcgccgagcccgtcgccgagggcggctacgcggccgccctgctgctg
gacggctgggccatgctcggccgccccgatctgcgggcgggggaggaggcgctgcgccgg
tggacggcggcggcggccctggtgcgcggacaggacgaggggggcacggtggtgatcgtg
gccgagccgacggagcgcgcggtgcaggcgctggtgcgctgggacccggcggggttcgcc
cggcgggagctggcggagcgggccgagctgggtttcccgccggtctcccggatggcctcg
gtgaccggtcccgtcgacgcgccggccgcgttcctcgccggggcggggctgccgcccgag
gccgagatcctggggcccgtgccggtgccctcggccgagcccggcaggccccgcagaccg
ggggacgccccgccgggggagagctgggagcgcgccctggtccgggtcgtgccgggccgg
ggggcggcgctcgcccgcgccctcaagacggcgctcgctgcccggatggccaagggggcg
gccgacccggtccgcatcaggatcgacccgcccgacatcggctga
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