Streptomyces californicus: I6J39_05230
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Entry
I6J39_05230 CDS
T07611
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_05230
Enzymes [BR:
scal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
I6J39_05230
DNA repair and recombination proteins [BR:
scal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
I6J39_05230
Prokaryotic type
I6J39_05230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF4265
Motif
Other DBs
NCBI-ProteinID:
QRV26761
LinkDB
All DBs
Position
1153927..1155294
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AA seq
455 aa
AA seq
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MSVAVVLFTSDLRLHDNPVLRAALRDADEVVPLFVRDDAVHRAGFDAPNRLAFLADCLAD
LDAGLRERGGRLVVRRGDAAREVKRVVERTGAASVHIAAGVSGYAAKREERVREALEGTG
CELRAHDAVVTALAPGRVVPTGGKDHFAVFTPYFRRWEAEGVRGTLTAPRTVRVPDDVSG
DELPDRDAIKNLSPGLARGGEIAGRKLVTSWVNGPMADYEDGHDDLAGDATSRLSPHLHF
GTVSAAELANRAREKGGSGGEAFVRQLAWRDFHHQVLAARPDASWSDYRARHDRWRSDED
EIDAWKSGRTGYPLVDAAMRQLAHEGWMHNRARMLAASFLTKTLYVDWRVGARHFLDLLV
DGDVANNQLNWQWVAGTGTDTRPNRVLNPVIQGKRFDPRGDYVRRWVPELAELDGAAIHE
PWKAEGLDRAGLDYPDPLVDLAEARARFERARGLD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgcggtggtgctgttcacctccgatctgcgtctgcacgacaatccggtgctg
cgtgccgccctgcgggacgcggacgaggtcgtcccgctgttcgtccgggacgacgccgtc
caccgcgccggattcgacgcgcccaaccggctggcgttcctcgcggactgcctggcggac
ctggacgcggggctccgggagcggggcggccggctggtcgtccgccggggcgacgcggcc
cgtgaggtgaaacgggtggtcgagcggaccggggcggcctccgtgcacatcgcggccggg
gtcagcgggtacgcggccaagcgcgaggaacgcgtccgggaggccctggagggcaccggc
tgcgaactgcgcgcccatgacgcggtggtcaccgcgctcgctccgggccgggtggtcccg
acgggcggcaaggaccacttcgcggtgttcaccccgtacttccgccgttgggaggcggag
ggagtacggggcacactgaccgctccccgcacggtgcgggtcccggacgacgtatccggc
gacgagctccccgaccgggacgcgatcaagaacctctcccccgggctggccaggggcggc
gagatcgcgggccgcaagctggtgacgtcctgggtgaacggtccgatggccgactacgag
gacggccacgacgacctggccggcgacgcgacgtcccggctctccccccatctgcacttc
ggcacggtctccgccgccgaactggccaaccgcgcgcgggagaagggcggttccggcggc
gaggccttcgtccgccagctggcctggcgcgacttccaccaccaggtcctcgcggcccgc
ccggacgcctcctggtccgactaccgggcgcgccacgaccgctggcgctccgacgaggac
gagatcgacgcctggaagtccgggcggacgggctacccgctggtcgacgcggcgatgcgg
cagctcgctcacgagggctggatgcacaaccgcgcccggatgctggccgcgagcttcctc
accaagacgctgtacgtggactggcgggtgggcgctcgccacttcctggacctgctggtc
gacggcgacgtggcgaacaaccagctcaactggcagtgggtggcgggcaccggcacggac
acccgccccaaccgggtgctgaacccggtgatccagggcaagcgcttcgacccccggggc
gactacgtacggcggtgggtgccggagctggcggaactggacggcgcggcgatccacgaa
ccctggaaggcggagggcctggaccgggcgggcctggactaccccgacccgctggtggac
ctggcggaggcgcgggcccgcttcgaacgggcccgcggcctggactga
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