Streptomyces californicus: I6J39_05275
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Entry
I6J39_05275 CDS
T07611
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scal03019
]
I6J39_05275
Enzymes [BR:
scal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
I6J39_05275
Messenger RNA biogenesis [BR:
scal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I6J39_05275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
nSTAND3
CTK3_C
Motif
Other DBs
NCBI-ProteinID:
QRV26769
LinkDB
All DBs
Position
complement(1163993..1166848)
Genome browser
AA seq
951 aa
AA seq
DB search
MTEDLSPAERYQASRERAAEMATALGPFREMYEFGLDPFQIEACQALEAGKGVLVAAPTG
SGKTIVGEFAVHLALEQGRKCFYTTPIKALSNQKFADLVKRYGADKVGLLTGDNSVNSEA
PVVVMTTEVLRNMLYAGSQSLSGLGYVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSL
SATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLWQHVMAGRRMYDLFEETTDHGGRGAGR
REVNPDLVRLARQENQNTYNPRDRRRGKMVREADRERERRQRGRIWTPGRPEVIDRLDNE
GLLPAITFIFSRAGCEAAVQQCLYAGLRLNDEDNRRLVREIVEERTASIPGEDLHVLGYY
EWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLV
KWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGMDPTALAGLAGTRTYPLRSS
FRPSYNMAVNLVQQFGRHRSRELLETSFAQFQADKSVVGISRQVQRNEEGLEGYKEGMTC
HLGDFEEYARLRRDLKDRETELAKQGAAQRRAAAASSLEKLKPGDVIHVPTGKFAGLALV
LDPGLPAGRANGHRGFDHHDGPRPLVLTAERQVKRLASMDFPVPVEALDRMRVPKSFNPR
SPQSRRDLASALRTKAGHIVPDRHRKGRAPAADDREIARLRTELRAHPCHGCDEREDHAR
WAERYHRLQRDTRQLEKRIEGRTNTIARTFDRIVALLTEMDYLRGDEVTQNGRRLARLYG
ELDLLASECLRDGVWEGLNPAELAACVSALVYEARQADDAVPPKVPSGPAKVALGEMVRI
WGRLDALEEDFKINQAEGVGQREPDLGFAWAVYMWASGRTLDEVLREAEMPAGDFVRWCK
QVIDVLGQVAAAAPRDAGGGADGTGGAGVAKNARKAVDAVLRGVVAYSSVG
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggacctctcaccagctgagcgataccaggcttctcgcgagcgcgcggccgag
atggcgacggctctcgggccgttccgcgagatgtacgagttcggtctggacccgttccag
atcgaggcatgccaggccctggaggccggcaagggggtgctggtcgcggcccccaccggg
tcgggcaagacgatcgtcggcgagttcgccgtgcacctggccctggagcagggccgcaaa
tgcttctacaccacaccgatcaaggcgctctccaaccagaagttcgccgacctggtcaag
cggtacggcgcggacaaggtcgggctgctgaccggcgacaacagcgtcaactccgaggcg
ccggtggtcgtgatgaccaccgaggtcctgcggaacatgctgtacgcgggttcccagtcc
ctctccggcctgggctatgtggtcatggacgaggtgcactacctctccgaccgcttccgg
ggcgcggtctgggaggaagtgatcatccacctcccggagtcggtgacgctggtctccctg
tcggcgaccgtctccaacgcggaggagttcggcgactggctggacaccgtgcgcggcgac
accgaggtgatcgtctccgagcaccgtccggtgccgctctggcagcacgtgatggccgga
cgccggatgtacgacctcttcgaggagaccaccgaccacggcggccggggcgccggacgc
cgcgaggtcaacccggacctggtccggctcgcccgccaggagaaccagaacacctacaac
ccgcgcgaccggcgccggggcaagatggtgcgcgaggccgaccgcgagcgcgagcggcgc
cagcgcggccggatctggacgcccggccggcccgaggtcatcgaccggctggacaacgag
ggcctgctgcccgccatcaccttcatcttcagccgtgcgggctgcgaggccgccgtccag
cagtgcctgtacgccggcctccggctcaacgacgaggacaaccgccggctggtccgcgag
atcgtcgaggagcggaccgcctccatccccggcgaggacctgcacgtcctgggctactac
gagtggctcgaaggactggaacggggcatcgccgcccaccacgcgggcatgctcccgacc
ttcaaggaggtcgtcgaggaactgttcgtccgggggctggtcaaggcggtcttcgccacc
gagacgctggcgctcggcatcaacatgcccgcgcgctccgtggtgctggagaagctcgtc
aagtggaacggcgagcagcacgccgacatcacccccggcgagtacacccagctcaccggc
cgggccggacggcgcggcatcgacgtcgagggccacgcggtggtcctgtggcagcgcggc
atggacccgacggcgctggccggcctcgcgggcacgcgcacgtatccgctgcgctccagc
ttccgcccgtcgtacaacatggcggtcaacctggtgcagcagttcgggcggcaccgttcg
cgcgaactgctggagacctcgttcgcccagttccaggcggacaagtcggtcgtggggatc
tcgcggcaggtgcagcgcaacgaggagggcctggagggctacaaggagggcatgacctgc
cacctcggggacttcgaggagtacgcgcgcctgcggcgcgacctcaaggaccgcgagacg
gagctggccaagcagggcgcggcgcagcgacgagcggcggcggcctcctcgctggagaag
ctgaagcccggagacgtcatccacgtgccgacggggaagttcgcggggctggcgctggtg
ctggacccggggctgcccgccgggcgggccaacgggcaccgcgggttcgaccaccacgac
gggccgcgaccgctagtgctgaccgccgagcggcaggtcaagcggctcgcctcgatggac
ttcccggtgccggtggaggcgctggaccggatgcgggtcccgaagtcgttcaacccgcgt
tcgccgcagtcccggcgcgaccttgcctcggcgctgcggaccaaggccgggcacatcgtg
cccgaccggcaccgcaaggggcgggcgcccgccgccgacgaccgggagatcgcccggctg
cggaccgagctgcgcgcccacccgtgccacgggtgcgacgagcgcgaggaccacgcgcgg
tgggccgagcgctaccaccggctgcagcgggacacccggcagctggagaagcggatcgag
gggcggacgaacacgatcgcccggaccttcgaccggatcgtcgcgctgctcacggagatg
gactacctccggggcgacgaggtcacgcagaacgggcgccggctggcccggctctacggc
gagctggacctgctcgccagcgagtgcctgcgggacggcgtgtgggagggccttaacccg
gccgaactcgccgcgtgcgtctcggcgctggtgtacgaggcacggcaggccgacgacgcg
gtcccgcccaaggtgccgtccggtcccgccaaggtcgcgctgggcgagatggtgcggatc
tgggggcggctggacgccctggaggaggacttcaagatcaaccaggcggagggggtcggc
cagcgcgaacccgacctcggtttcgcctgggcggtctacatgtgggcctccggccggacg
ctggacgaggtgttgcgcgaggcggagatgcctgcgggggacttcgtccggtggtgcaag
caggtgatcgacgtgctgggccaggtggcggcggccgcgccccgggacgcggggggcggg
gcggacggcaccgggggcgccggcgtggcgaagaacgcgcgcaaggcggtggacgcggtg
ctgcggggggttgtggcgtacagctctgtggggtga
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