Streptomyces californicus: I6J39_06955
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Entry
I6J39_06955 CDS
T07611
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
scal
Streptomyces californicus
Pathway
scal03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
I6J39_06955 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
scal03011
]
I6J39_06955 (rpsA)
Ribosome [BR:
scal03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
I6J39_06955 (rpsA)
Bacteria
I6J39_06955 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
SOGA1-2-like_CC
Motif
Other DBs
NCBI-ProteinID:
QRV27081
LinkDB
All DBs
Position
complement(1534647..1536161)
Genome browser
AA seq
504 aa
AA seq
DB search
MTSSTETTATTPQVAVNDIGDADAFLAAIDETIKYFNDGDIVDGVIVKVDRDEVLLDIGY
KTEGVIPSRELSIKHDVDPNEVVKVGDEIEALVLQKEDKEGRLILSKKRAQYERAWGTIE
KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD
KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV
SELSWKHIDHPSEVVEVGQEVTVEVLDVDMDRERVSLSLKATQEDPWQQFARTHQIGQVV
PGKVTKLVPFGAFVRVDEGIEGLVHISELAERHVEIPEQVVQVNDEIFVKVIDIDLERRR
ISLSLKQANESFGGDPASVEFDPTLYGMAASYDDQGNYIYPEGFDPETNDWLEGFEAQRE
VWETQYAEAQQRFEQHQAQVIKSREADEAAAAEGAAAPAGAAPAASGGSGGGGSYSSESA
DNSGALASDEALAALREKLAGGQS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcagcaccgagaccaccgccaccactccgcaggttgcggtcaacgacatcggc
gacgcggacgcgttcctcgcggcgatcgacgagacgatcaagtacttcaacgacggcgac
atcgttgacggtgtcatcgtcaaggttgaccgggacgaggttctcctcgacatcggttac
aagaccgaaggtgtcatcccgagccgcgagctctcgatcaagcacgacgtcgacccgaac
gaggtcgtcaaggtcggcgacgagatcgaggccctggttctccagaaggaggacaaggaa
ggccgcctgatcctctcgaagaagcgcgctcagtacgagcgtgcctggggcaccatcgag
aagatcaaggaagaggacggcatcgtcaccggtaccgtcatcgaggtcgtcaagggtggt
ctcatcctcgacatcggcctccgcggcttcctcccggcgtcgctcgtcgagatgcgtcgt
gtccgcgacctccagccctacgtgggcaaggagctcgaggcgaagatcatcgagctggac
aagaaccgcaacaacgtggtcctgtcccgccgcgcctggctcgagcagacccagtccgag
gtgcgccagacgttcctcaccaccctgcagaagggtcaggtccgctccggcgtcgtctcc
tcgatcgtcaacttcggtgccttcgtggacctgggcggcgtcgacggtctcgtgcacgtc
tccgagctgtcctggaagcacatcgaccacccctccgaggtcgtcgaggtcggtcaggaa
gtcaccgtcgaggtcctcgacgtcgacatggaccgcgagcgcgtctccctgtcgctcaag
gcgacgcaggaagacccgtggcagcagttcgcccgtacgcaccagatcggtcaggtcgtc
ccgggtaaggtcaccaagctcgttccgttcggtgcgttcgtccgcgtcgacgagggcatc
gagggtctggtccacatctccgagctggccgagcgccacgtggagatcccggagcaggtc
gtccaggtcaacgacgagatcttcgtcaaggtcatcgacatcgacctcgagcgccgccgc
atcagcctctcgctgaagcaggccaacgagtccttcggtggcgacccggcctcggtcgag
ttcgacccgaccctgtacggcatggccgcgtcctacgacgaccagggcaactacatctac
cccgagggcttcgaccccgagaccaacgactggctcgagggcttcgaggcgcagcgcgag
gtctgggagacccagtacgccgaggcgcagcagcgcttcgagcagcaccaggcccaggtc
atcaagtcccgcgaggccgacgaggctgccgcggccgagggcgctgccgccccggccggc
gctgctccggccgcctccggcggcagcggtggcggcggctcctactcctcggagtcggcg
gacaactccggcgccctggcgtcggacgaggcccttgccgcgctgcgcgagaagctcgcg
ggcggccagagctga
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