Streptomyces californicus: I6J39_06990
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Entry
I6J39_06990 CDS
T07611
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scal
Streptomyces californicus
Pathway
scal03030
DNA replication
scal03410
Base excision repair
scal03420
Nucleotide excision repair
scal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J39_06990 (polA)
03410 Base excision repair
I6J39_06990 (polA)
03420 Nucleotide excision repair
I6J39_06990 (polA)
03440 Homologous recombination
I6J39_06990 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scal03032
]
I6J39_06990 (polA)
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_06990 (polA)
Enzymes [BR:
scal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6J39_06990 (polA)
DNA replication proteins [BR:
scal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I6J39_06990 (polA)
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
I6J39_06990 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6J39_06990 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QRV27088
LinkDB
All DBs
Position
complement(1544180..1546891)
Genome browser
AA seq
903 aa
AA seq
DB search
MAETASKKTADNRPRLLLMDGHSLAYRAFFALPAENFTTAVGQPTNAVYGFMSMLANTLR
DEAPTHFAVAFDVSRKTWRSEEFPEYKANRSKTPDEFKGQVELIGELLDAMNADRFAVDG
FEADDVIATLATQAEEAGFEVLIVTGDRDSFQLITDNVTVLYPTKGVSELTRFTPEKVVE
KYGLTPRQYPDFAALRGDPSDNLPSIPKVGEKTAAKWINQFGTFDELIARADEVKGVAGQ
NLRDHLDAVKMNRVLTEMVRDVELPKTPVELERAPYDRTAVTGILDILEIRNPSLRERLL
AVDPGAAEAEPPAPAAGIELDGAVLGSGEVGPWLEEHGAQPLGVMTVDTWSLGAGTVTEV
ALGAADGSAAWLDPTQLDEADGRAFAAWVADGSRPKVLHNAKNVMRVFPEMGWRLEGVTM
DTALAAYLVKPGRRSFALDALAVEYLGRELAPAAASDGQLAFGADDRAEQDALMAQARAV
LDLGEAFTTRLQEVGAAELLHDMELPTSILLARLERHGIAADRAHLESMEQQFAGTVQQA
VKEAHAAVGREFNLGSPKQLQEILFGELGLPKTKKTKTGYTTDADALAWLAAQTEHELPV
LMLRHREQAKLRVTVEGLIKTIAEDGRIHTTFNQTVAATGRLSSTDPNLQNIPVRTDEGR
AIRRGFVVGEGFETLMTADYSQIELRVMAHLSEDAGLIEAFTSGEDLHTTVASQVFGVGK
DAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIDPAEARVLMDTYFERFGGVRDYLHRVV
EEARATGYTETILGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKVAMLRVDKA
LREAELTSRMLLQVHDEIVLEIAKGERKRVEEIVRHEMANAVKLRAPLDVSVGVGTDWES
AAH
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagacggcatcgaagaagacggcagacaaccgaccgcgcctgctcctcatggac
gggcactccctggcgtaccgggcgttcttcgccctgcccgcggagaatttcacgacggcg
gtgggccagccgacgaacgccgtgtacggcttcatgtcgatgctggcgaacacgttgcgt
gatgaggcgcccacgcatttcgcggtcgcgttcgacgtgtcccgcaagacgtggcggtcc
gaggagttcccggagtacaaggcgaaccgttccaagacccccgacgagttcaaggggcag
gtggagctgatcggggagctgctggacgcgatgaacgcggaccggttcgcggtggacggg
ttcgaggcggacgacgtcatcgcgacgctggcgacccaggcggaggaggccgggttcgag
gtgctgatcgtcaccggcgaccgggactccttccagttgatcacggacaacgtgaccgtg
ctgtaccccacgaagggggtctccgagctgacccggttcacgccggagaaggtcgtcgag
aagtacgggctcactccgcggcagtatccggacttcgcggccctgcgcggcgacccgtcg
gacaatctgccgagcatcccgaaggtcggggagaagacggccgcgaagtggatcaaccag
ttcggtacgttcgacgagctgatcgcgcgggccgacgaggtcaagggtgtggccgggcag
aatctccgggaccacctggacgcggtgaagatgaaccgggtgctgaccgagatggtccgg
gacgtggagctgccgaagactccggtggagctggagcgcgctccgtacgaccgtacggcg
gtcacgggcatcctcgacatactggagatccgcaatccgagcctgcgggagcggctgctc
gccgtggacccgggggcggcggaggccgagccgccggcgccggcggccgggatcgagctg
gacggggcggtgctcggttccggcgaggtcgggccgtggctggaggagcacggggcgcag
ccgctcggcgtcatgacggtcgacacgtggtcgctgggggccgggacggtcaccgaggtg
gcgctcggcgccgcggacgggtcggccgcctggctggacccgacgcagctggacgaggcc
gacgggcgggcgttcgccgcctgggtcgcggacgggtcccggccgaaggtgctgcacaac
gcgaagaacgtgatgcgggtcttcccggagatgggctggcggctcgaaggcgtcacgatg
gacacggcgctcgccgcgtatctggtgaagccggggcggcgctccttcgccctggacgcg
ctggccgtggagtacctgggtcgtgagctggcgccggcggccgcgtccgacgggcagctc
gcgttcggcgcggacgaccgggccgagcaggacgccctgatggcgcaggcccgtgcggtg
ctcgatctgggcgaggcgttcacgacccggttgcaggaggtgggcgcggcggagctgctg
cacgacatggagctgccgacgtcgatcctcctggcccggctggagcggcacgggatcgcc
gcggaccgggcccatctggagtcgatggagcagcagttcgccgggacggtgcagcaggcg
gtgaaggaggcgcacgcggcggtcggccgcgagttcaacctcggttcgcccaagcagctc
caggagatcctcttcggtgagctgggtctgccgaagacgaagaagaccaagaccggttac
acgacggacgcggacgcgctggcgtggctggcggcgcagaccgagcacgagctgccggtc
ctgatgctgcgccaccgtgagcaggcgaagctgcgggtcaccgtcgaggggctgatcaag
acgatcgccgaggacgggcgcatccacaccacgttcaaccagacggtggcggcgacgggg
cggctctcctccaccgacccgaatctgcagaacatcccggtccgtaccgacgagggccgg
gcgatccgccggggcttcgtcgtcggtgagggcttcgagacactgatgacggcggactac
agccagatcgagctgcgggtgatggcgcacctgtccgaggacgccggtctgatcgaggcg
ttcacctccggcgaggacctgcacaccacggtcgcctcgcaggtcttcggcgtcgggaag
gacgcggtcgacgcggagatgcgccgcaagatcaaggccatgtcctacggtctggcgtac
gggctctccgcgttcggtctctcccagcagctgaacatcgacccggcggaggcccgggtg
ctgatggacacctacttcgagcggttcggcggggtgcgggactatctgcaccgggtcgtg
gaggaggccagggccaccggttacacggagacgatcctcggccgccgccgctacctcccc
gatctgaacagcgacaaccgccagcgtcgtgaggccgccgagcggatggcgttgaacgcc
ccgatccagggcacggccgccgacatcgtgaaggtggcgatgctgcgggtggacaaggcg
ctgcgggaggcggagctgacctcgcggatgctgctccaggtccacgacgaaatcgtcctg
gagatcgcgaagggcgagcggaagcgggtggaggagatcgtgcgccacgagatggcgaac
gcggtcaagctgcgcgccccgctcgatgtgtcggtcggcgtcggcacggactgggagtcg
gccgcgcactga
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