Streptomyces californicus: I6J39_07420
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Entry
I6J39_07420 CDS
T07611
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scal
Streptomyces californicus
Pathway
scal03030
DNA replication
scal03430
Mismatch repair
scal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J39_07420 (dnaE)
03430 Mismatch repair
I6J39_07420 (dnaE)
03440 Homologous recombination
I6J39_07420 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scal03032
]
I6J39_07420 (dnaE)
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_07420 (dnaE)
Enzymes [BR:
scal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6J39_07420 (dnaE)
DNA replication proteins [BR:
scal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6J39_07420 (dnaE)
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6J39_07420 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
QRV27164
LinkDB
All DBs
Position
complement(1637676..1641212)
Genome browser
AA seq
1178 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFEAANEMGMTHIAMTDHGNLHGAYDFFHSAQKA
EVTPIIGIEAYVAPESRKHKRKVQWGQPHQKRDDVSGSGGYTHKTIWAANRTGLHNLFRL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGEVQTRLRLGQFDEAVQAASDYKD
IFGEGRYFLELMDHGIEIERRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKTTDEMYAVDSSDAWQEGCRNTLLVAQQIDTTGMFEKRD
LMPKFEIPEGFTEVTWFQEEVRVGMARRFPNGVPDDRQKQVEYEMDIIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIEHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPKHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPVWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAIKMVKS
NKGIDLEMLALPLDDPKTYELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHTNYAERKNGRQEITPIHPELEEPLKEVLGLTYGLIVYQEQVQKAAQIVAG
YSLGEADILRRVMGKKKPEELAKNFVLFEKGAKEKGFSDAAIKALWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
LSNFAAQGDDVILFGLTAVRNVGQNVVDSIIRSRKAKGKYSSFPDFLDKVEAVVCNKRTV
ESLIKAGAFDEMGHTRKGLVAHHEPMIDNVVQVKRKEAEGQFDLFGGGEEESGEPGFGLD
VEFSDIEWEKSYLLAQEREMLGLYVSDHPLFGLEHVLSDKADASISQLTGGDYSDGSVVT
VGGIISGLQRKMTKQGNAWAIATVEDLAGTIECMFFPATYQLVSTQLVEDTVVFVKGRLD
KREDVPRLVAMEMQVPDISNAGTNAPVILTIPTVKITPPMVSRLGEVLSHHRGDTEVRIR
LQGPRKTTVLRLDRHRVKADSALFGDLKVLLGPSCLAG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgcccttcacgcacctgcacgttcacacccagtactcgctgctggacggt
gcggcgcggctcaaggacatgttcgaagcggccaacgagatgggcatgacgcacatcgcg
atgaccgaccacggcaacctccacggggcctacgacttcttccactcggcgcagaaggcg
gaggtcacgccgatcatcggcatcgaggcgtacgtcgccccggagtcgcgcaagcacaag
cgcaaggtgcagtgggggcagccgcaccagaagcgcgacgacgtgtccggatccggtggg
tacacccacaagaccatctgggcggcgaacaggaccgggctgcacaacctcttccggctc
tcctccgacgcgtacgccgagggctggctccagaagtggccccggatggacaaggagacc
atctcccagtggtccgagggactcatcgcctccaccggctgcccctcgggcgaggtgcag
acccggctgaggctcggccagttcgacgaggcggtgcaggcggcctccgactacaaggac
atcttcggcgagggccggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacggactcctggagatcggcaagaagctcggcatcccgccgctcgtgacg
aacgactcccactacacgtacgcgcacgaggccaccgcccacgacgccctgctctgcatc
cagaccggcaagaacctctcggacccggaccgcttccgcttcgacggcaccggctactac
ctgaagacgacggacgagatgtacgccgtcgactcctccgacgcctggcaggaggggtgc
cgcaacaccctcctggtcgcgcagcagatcgacaccaccggcatgttcgagaagcgcgac
ctgatgccgaagttcgagatcccggagggcttcaccgaggtcacctggttccaggaggag
gtccgggtcggcatggcccgccgcttcccgaacggggtccccgacgaccggcagaagcag
gtcgagtacgagatggacatcatcatccagatggggttcccggggtacttcctcgtcgtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtgggccccggccgtggttcg
gcggccggttcgatcgtggcgtacgccatgggcatcaccgacctcgacccgatcgagcac
gggctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgccggcgcgtcgaggtgatccggtacgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacgtacggcaagatcaaggcgaagaacgccatcaaggac
tccgcccgcgtgctgggctacccgtacgcgatgggcgaccgcctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcaccgaccccaagcacccgcgc
tacagcgaggcgggcgagatccgggggatgtacgagaacgagccggacgtcaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgccgccggc
gtcatcatgtccagcgagccgatcgtcgaccacgcccccgtctgggtgcggcacaccgac
ggcgtcaccatcacccagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctgacgatcatggacgacgccatcaagatggtgaagtcc
aacaagggcatcgacctggagatgctcgccctgccgctggacgaccccaagacgtacgaa
ctgctctgccgcggtgacacgctcggcgtcttccagttcgacggcgggcccatgcgctcc
ctgctgcgccagatgcagcccgacaacttcgaggacatctccgccgtctcggccctctac
cggccgggcccgatgggcatgaactcgcacacgaactacgcggagcgcaagaacggccgc
caggagatcaccccgatccacccggagctggaggagcccctcaaggaggtcctcggcctc
acctacggcctgatcgtctaccaggagcaggtccagaaggccgcccagatcgtcgccggg
tactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgaggaa
ctggcgaagaacttcgtcctcttcgagaagggcgccaaggagaagggcttctccgacgcg
gctatcaaggcgctgtgggacgtcctggtgccgttcgccggatacgcgttcaacaaggcg
cactcctcggcgtacgggctggtcacctactggaccgcctacctgaaggcgaactacccg
gccgagtacatggcggccctgctgacctcggtcaaggacgacaaggacaagtccgcggtc
tacctcaacgagtgccgccgcatgggcatcaaggtgctcccgcccaacgtcaacgagtcg
ctgtccaacttcgccgcccagggcgacgacgtgatcctcttcggcctgaccgccgtccgc
aacgtcggccagaacgtcgtcgactcgatcatccggtcgcggaaggcgaaggggaagtac
agctccttccccgacttcctggacaaggtcgaggccgtcgtctgcaacaagcgcaccgtc
gagtcgctgatcaaggccggcgccttcgacgagatgggccacacccgcaaggggctcgtc
gcccaccacgagccgatgatcgacaacgtggtgcaggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcggcggcgaggaggagagcggcgagccgggcttcgggctcgac
gtggagttctccgacatcgagtgggagaagtcctacctgctcgcccaggagcgggagatg
ctcggcctgtacgtctccgaccacccgctgttcgggctggagcacgtgctgtccgacaag
gccgacgcctcgatctcccagctcaccggcggggactactcggacggttccgtcgtcacc
gtcggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcctgggcc
atcgccacggtggaggacctggcgggcaccatcgagtgcatgttcttccccgccacctac
cagctggtctccacccagctcgtcgaggacaccgtcgtcttcgtcaaggggcgcctcgac
aagcgcgaggacgtgccccggctggtcgcgatggagatgcaggtccccgacatctccaac
gcggggaccaacgcgcccgtcatcctcaccatccccaccgtgaagatcaccccgcccatg
gtctcccggctcggcgaggtgctcagccaccaccggggcgacaccgaggtgcggatcagg
ctccagggcccccgcaagacgacggtcctgcggctcgaccggcaccgggtcaaggccgac
tcggccctcttcggcgacctcaaggtgctgctcggcccgtcctgcctggccggctga
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integrated database retrieval system
