Streptomyces californicus: I6J39_09925
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Entry
I6J39_09925 CDS
T07611
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
scal
Streptomyces californicus
Pathway
scal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I6J39_09925 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_09925 (recO)
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
I6J39_09925 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
I6J39_09925 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
ArfGap
Motif
Other DBs
NCBI-ProteinID:
QRV27596
LinkDB
All DBs
Position
complement(2225742..2226488)
Genome browser
AA seq
248 aa
AA seq
DB search
MSLFRDDGIVLRTQKLGEADRIITILTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQ
FFARGSELVGRGLPLCTQSETIAPYGGGIVADYARYTAGTAMLETAERFTDHEGEPAVQQ
YLLLVGGLRTLARGEHAPHLILDAFLLRSLAVNGYAPSFEDCAKCGMPGPNRFFSVAAGG
VICGDCRVPGSVVPSAQALELLSALLSGDWATADACEARHVREGSGLVSAYLHWHLERGL
RSLRYVEK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgttccgggacgacggcatcgtgctgcgtacgcagaaactgggcgaggccgac
cggatcatcacgatcctgacccgcggccacggccgggtccgcgccgtcgcccgcggggtg
cgccgcaccaagtccaagttcggcgcccggctggagcccttctcccacgtcgacgtgcag
ttcttcgcccgcggcagcgagctggtcggccgggggctgccgctctgcacccagagcgag
acgatcgccccgtacggcggtgggatcgtcgccgactacgcccgctacaccgccggcacc
gcgatgctggagaccgccgagcggttcaccgaccacgagggcgaacctgccgtccagcag
tacctgctgctcgtcggcggcctgcgcaccctcgcccggggcgagcacgccccccacctg
atcctggacgcgttcctgctgcgctcgctcgcggtgaacgggtacgcccccagcttcgag
gactgcgccaagtgcggaatgcccggaccgaaccgtttcttctcggtcgcggcggggggc
gtcatctgcggtgactgccgggtccccgggagcgtcgtaccctcggcacaggccctggaa
ctgctgagcgcgctgctcagcggggactgggcgacggcggacgcgtgcgaggcgcgtcat
gtcagggaggggagcgggctggtgtccgcctatctgcactggcatctggagcgcggcctg
cgctcgctgcggtacgtcgagaagtga
DBGET
integrated database retrieval system
