Streptomyces californicus: I6J39_10060
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Entry
I6J39_10060 CDS
T07611
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scal
Streptomyces californicus
Pathway
scal00061
Fatty acid biosynthesis
scal00071
Fatty acid degradation
scal01100
Metabolic pathways
scal01212
Fatty acid metabolism
scal02024
Quorum sensing
scal04146
Peroxisome
Module
scal_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
I6J39_10060
00071 Fatty acid degradation
I6J39_10060
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
I6J39_10060
09145 Cellular community - prokaryotes
02024 Quorum sensing
I6J39_10060
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scal01004
]
I6J39_10060
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scal04147
]
I6J39_10060
Enzymes [BR:
scal01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
I6J39_10060
Lipid biosynthesis proteins [BR:
scal01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
I6J39_10060
Exosome [BR:
scal04147
]
Exosomal proteins
Exosomal proteins of breast milk
I6J39_10060
Exosomal proteins of breast cancer cells
I6J39_10060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QRV27622
LinkDB
All DBs
Position
complement(2256387..2258276)
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AA seq
629 aa
AA seq
DB search
MSDTQTLIDNRPPSVASLFIDRVAATPDGEAYRYPVPPASGEGPDDWKSLSWGQAAERVF
AIAAGLIALGVQPEERVALSSATRVEWILIDLGVMCAGAATTTIYPSTNAEESAFILSDS
ESRVLVAEDAEQLAKARETRKDLPDLAHVVVIDPAGVEPAEGDPDGWIITLADLEARGNE
LLAETPDAVTGRVAAITADQLATLIYTSGTTGRPKGVRLPHDNWSYMAKATVATGLITAE
DVQYLWLPLAHVFGKVLTSGQIEVGHVTAIDGRIDKIIENLPVVQPTYMAAVPRIFEKVY
NGVASKARAGGGAKYKIFQWAAGVAREYAKVSQDNFRRTGNPSVPFALGAKHKVADALVF
SKIREAFGGRLRACISGSAALAPDIGYFFAGAGVHILEGYGLTESSAASFVNPGEAYRTG
TVGKPLPGTEVRIADDGEILMRGPGIMQGYHKLPDKTEEVLESDGWFHTGDIGELSPDGY
LRITDRKKDLIKTSGGKYVAPAEVEGQFKAVCPFVSNILVHGADRNFCTALIALDEPTLL
GWAAENGLAGKSYAEVVAAPRTVELIDGYVKQLNEGLQRWQTIKKFRLLPRDLDVEHGEL
TPSLKLKRPVVEREYRGLIDEMYAGTREA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacacacagaccttgatcgataaccggccgccctccgtggcgtcccttttcatc
gaccgcgtggcggcgacccccgacggggaggcgtaccgctatccggtgccgccggcctcg
ggcgaggggcccgacgactggaagtccctgagctggggccaggccgctgagcgggtcttc
gccatcgccgcgggcctcatcgcgctcggcgtgcagccggaggagcgcgtcgccctctcc
tcggccacccgggtggagtggatcctcatcgacctcggggtgatgtgcgcgggcgccgcg
accaccacgatctacccctcgacgaacgccgaggagtccgcgttcatcctgtccgactcc
gagagccgggtgctcgtcgcggaggacgccgagcagctcgccaaggcccgggagacccgg
aaggacctgccggacctcgcccacgtcgtcgtcatcgacccggcgggggtcgagcccgcc
gagggcgaccccgacggctggatcatcaccctggccgacctggaggcccggggcaacgag
ctgctggccgagaccccggacgcggtcaccggacgggtcgccgcgatcaccgccgaccag
ctcgccaccctgatctacacctcgggcaccaccggccgccccaagggcgtacggctgccg
cacgacaactggtcgtacatggccaaggccaccgtggcgaccgggctgatcaccgccgag
gacgtgcagtacctctggctgccgctcgcccacgtcttcggcaaggtcctcacctccggc
cagatcgaggtcggccacgtcaccgcgatcgacggccgcatcgacaagatcatcgagaac
ctgccggtcgtccagccgacctacatggccgccgtgccccggatcttcgagaaggtctac
aacggggtcgcctccaaggcccgtgcgggcggcggcgccaagtacaagatcttccagtgg
gcggcgggggtggcccgcgagtacgccaaggtctcccaggacaacttccgccggaccggc
aacccctccgtgcccttcgcgctcggcgccaagcacaaggtcgccgacgcgctcgtcttc
tccaagatccgtgaggcgttcggcggccggctccgcgcctgcatctccggctccgccgcc
ctcgccccggacatcggctacttcttcgcgggcgccggcgtccacatcctggagggctac
ggcctcaccgagagcagcgccgcctccttcgtcaacccgggcgaggcgtaccgcacgggc
accgtcggcaagccgctccccggcaccgaggtgcggatcgcggacgacggcgagatcctc
atgcgcggccccggcatcatgcagggctaccacaagctgcccgacaagaccgaggaggtt
ctggagtcggacggctggttccacaccggtgacatcggcgagctgtcgcccgacggctac
ctccgcatcaccgaccgcaagaaggacctgatcaagacgtcgggcggcaagtacgtcgcc
ccggcggaggtcgagggccagttcaaggcggtctgcccgttcgtctccaacatcctggtg
cacggcgcggaccgtaacttctgcaccgcgctcatcgccctcgacgagcccaccctcctc
ggctgggccgccgagaacgggctggcgggcaagtcgtacgcggaggtcgtcgcggccccc
cggacggtcgagctgatcgacgggtacgtcaagcagctcaacgagggcctccagcgctgg
cagaccatcaagaagttccgcctcctgccgcgcgacctggacgtcgagcacggcgagctg
acccccagcctcaagctgaagcgtccggtcgtcgagcgcgagtaccgcgggcttatcgac
gagatgtacgcgggcacgcgcgaggcctga
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