Streptomyces californicus: I6J39_10075
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Entry
I6J39_10075 CDS
T07611
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
scal
Streptomyces californicus
Pathway
scal03030
DNA replication
scal03430
Mismatch repair
scal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J39_10075 (holA)
03430 Mismatch repair
I6J39_10075 (holA)
03440 Homologous recombination
I6J39_10075 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scal03032
]
I6J39_10075 (holA)
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_10075 (holA)
Enzymes [BR:
scal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6J39_10075 (holA)
DNA replication proteins [BR:
scal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6J39_10075 (holA)
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6J39_10075 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QRV27625
LinkDB
All DBs
Position
complement(2261362..2262348)
Genome browser
AA seq
328 aa
AA seq
DB search
MATRKNSTDDPLAPLTLAVGQEDLLLDRAVQQVVAAARAADADTDVRDLASDQLQPGTLA
ELTSPSLFAERKVVIVRNAQDLSADTVKDVKAYLGSPVEEITLVLLHAGGAKGKGLLDAA
RKAGAREVACPKTTKPAERLTFVRSEFRTHGRSATPEACQALVDSIGSDLRELASAVSQL
VADVEGTIDEAVVGRYYTGRAEASSFTVADRAVEGRAAEALEALRWSLSTGVPPVLITSA
LAQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGVAVALRAVAAADA
GVKGGGDDPEYALEKAVVVIARAARSGR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaggaagaattccaccgacgatccgctcgcccccctcaccctcgccgtgggc
caggaggacctcctcctggaccgtgcggtgcagcaggtggtggcggccgcgcgcgctgcc
gacgccgacacggacgtacgcgatctggcgtccgaccagttgcagcccggcacgctcgcc
gagctgaccagcccctcgctcttcgccgagcgcaaggtcgtgatcgtgcgcaacgcgcag
gacctctcggccgacaccgtcaaggacgtcaaggcgtacctcggctcgccggtcgaggag
atcaccctcgtcctgctgcacgcgggcggggccaagggcaagggcctgctcgacgcggca
cgcaaggcgggcgcccgggaggtcgcctgcccgaagaccaccaagccggccgagcggctc
acgttcgtacggtcggagttccggacgcacgggcggtccgcgacgccggaggcatgccag
gcgctcgtcgactccatcggcagcgatctgcgggagctggccagcgcggtgtcccagctg
gtcgcggacgtcgagggcacgatcgatgaggccgtcgtcgggcgctactacaccgggcgt
gcggaagcctcgtcgttcaccgtcgccgaccgggcggtcgaagggcgcgcggcggaggcg
ctggaggcgctgcggtggtcgttgtcgaccggggtcccgcccgtcctgatcaccagcgca
ctggcccagggggtgcgggcgatcgggaagctgtcctcggcgcggggaggccggcccgcc
gatctggcacgggagctgggcatgccgccgtggaagatcgaccgcgtacgccagcagatg
cggggctggactccggacggggtcgcggtggccctgcgggcggtggcggcggcggacgcg
ggggtgaagggcggaggggacgaccccgagtacgccctggagaaggccgtcgtcgtcatc
gcccgggccgctcggtcggggcggtag
DBGET
integrated database retrieval system
