Streptomyces californicus: I6J39_10260
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Entry
I6J39_10260 CDS
T07611
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
scal
Streptomyces californicus
Pathway
scal00550
Peptidoglycan biosynthesis
scal01100
Metabolic pathways
scal01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I6J39_10260 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I6J39_10260 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scal01011
]
I6J39_10260 (mrdA)
Enzymes [BR:
scal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
I6J39_10260 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
scal01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
I6J39_10260 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QRV27658
LinkDB
All DBs
Position
complement(2307673..2309895)
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AA seq
740 aa
AA seq
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MSNIPETGRTQRVQIRLIVIQVLVFSLLLTLGGRLWYLQIRNGDEYTAEAAGNGVQQVVQ
PAVRGSILDARGVPLADNETRLVVSASRTELLKMKDDGVGVLTRLADVLGMKAKDVQDKV
RLCDAKTPQPCWNGSPYQPIPVTDEATTQQALQIRERAEDFPGITAEPTAVRRYAAPAKA
KTAQVLGYLSPVTDEEIKQAQDGPSPYLRSDQVGRSGIERTYDKELRGKAGVTRYEVDNL
GRVMGEAENDPAVAGSTLVTSLDARVQAVAEYELAQAMKTVRQETDKITGRKYEADSGAV
VVMESKTGRVVSMASQPDYDPNDWVGGISGKQYAKLTSKKSNYPLLNRGIQGQAPAGSIF
KVVSASAAVRGGHAFNDLYECSSSYSLGNQTFANFESQGHGPITLGDALKYSCNTVFYRL
GHDEWVKDGGIKPKKDAKNWFYRTARDFGLGSETGIDLPNEVKGRIPDRQWKQDFWKANK
DAWCKEGKKGGTYVQQIAYESCLEGNQLKAYDSINYAIGQGDVLVTPIQMATAYAAISNG
GTLHEPTVGKAVISPDGKSVREITPKAAGKLPVSARTIKDLDKGLRSVVEPGGTAAWRFG
GWPQDKIPMRAKTGTAQVYGKQTTAWFATYTDDFTIVMTISQGGTGSGAAGPAVRKIYDA
LYGLDAEGNQDKKRALLPKPQKALPKIQSDGTIYAPKVKPYDPAPITPEQQPGGQEPQLP
LQPGGQPGLTGSPASTGRQP
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacattcccgagaccgggcggacccagcgggttcagatccggctcatcgtcatc
caggtcctcgtcttctccctgctgctcaccctcggcggccgcctctggtacctccagatc
cgcaacggcgacgagtacaccgccgaagccgcgggcaacggcgtgcagcaggtcgtccag
cccgccgtgcgcggctcgatcctcgacgcccggggcgtccccctcgccgacaacgagacc
cgcctcgtcgtctccgccagccgcaccgaactgctgaagatgaaggacgacggcgtcggc
gtcctcacccggctcgccgacgtcctgggcatgaaggcgaaggacgtccaggacaaggtc
cgcctctgcgacgcgaagaccccccagccctgctggaacggatcgccctaccagccgatc
ccggtcaccgacgaggccaccacccagcaggccctccagatccgcgagcgcgccgaggac
ttccccggcatcaccgccgaacccaccgccgtacgccgctacgccgcacccgccaaggcg
aagacggcgcaggttctcggctatctctcgcccgtcaccgacgaggagatcaagcaggcc
caggacggcccgtcgccctacctgcgctccgaccaggtcggccgctccggcatcgagcgc
acctacgacaaggaactgcgcggcaaggcgggcgtcacccgctacgaggtcgacaacctc
ggccgcgtcatgggcgaggcggagaacgacccggcggtggccggctccaccctcgtcacc
agtctggacgcccgggtgcaggcggtcgccgagtacgagctggcgcaggccatgaagacc
gtccggcaggagaccgacaagatcaccggccgcaagtacgaggccgactccggcgccgtc
gtcgtcatggagtccaagaccggccgagtcgtctcgatggcctcccagcccgactacgac
ccgaacgactgggtcggcggcatctccggcaagcagtacgccaagctcaccagcaagaag
tccaactacccgctgctcaaccggggcatccagggccaggccccggccggctcgatcttc
aaggtggtctcggccagtgccgccgtgcgcggcggccacgccttcaacgacctgtacgag
tgcagcagctcctacagcctcggcaaccagaccttcgcgaacttcgagtcccagggccac
ggccccatcacgctcggggacgcgctcaagtactcctgcaacaccgtcttctaccgcctc
ggccacgacgagtgggtcaaggacggcggcataaagcccaagaaggacgccaagaactgg
ttctaccgcaccgcccgtgacttcggcctcggctccgagaccggcatcgacctgcccaac
gaggtcaagggtcgcatcccggaccgccagtggaagcaggacttctggaaggccaacaag
gacgcctggtgcaaggagggcaagaagggcggcacctacgtccagcagatcgcgtacgag
agctgcctcgaaggcaaccagctcaaggcgtacgacagcatcaactacgcgatcggccag
ggtgacgtgctcgtcacgcccatccagatggccaccgcctacgccgccatcagcaacggc
ggcaccctccacgagcccaccgtcggcaaggccgtgatcagccccgacggcaagtccgtc
cgggagatcacgcccaaggccgccgggaagctcccggtcagcgcccggaccatcaaggac
ctcgacaaggggctgcgctcggtggtcgagccgggcggcaccgccgcctggcggttcggc
ggctggccgcaggacaagatcccgatgcgcgccaagaccggtacggcccaggtgtacggc
aagcagaccaccgcctggttcgccacctacaccgacgacttcacgatcgtcatgacgatc
tcccagggcggcaccggctccggtgccgccggacccgccgtccgcaagatctacgacgcg
ctctacggcctcgacgccgagggcaaccaggacaagaagagggccttgctgccgaagccc
cagaaggcgctgccgaagatccagagcgacggcaccatctacgcgccgaaggtcaagccc
tacgaccccgccccgatcacgcccgagcagcagccggggggccaggagccccaactgccg
ctgcagccgggcggccagcccggactcaccggatcgcccgcgtcgacggggaggcagccc
tga
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