Streptomyces californicus: I6J39_10895
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Entry
I6J39_10895 CDS
T07611
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
scal
Streptomyces californicus
Pathway
scal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I6J39_10895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_10895
Enzymes [BR:
scal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I6J39_10895
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I6J39_10895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
TraI_hel_assoc_N
PIF1
PhoH
AAA_16
NPHP3_N
UvrD-helicase
nSTAND3
DEAD
HTH_IclR
UvrD_C
AAA
TrwB_AAD_bind
SLFN-g3_helicase
DUF87
ABC_tran
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QRV27763
LinkDB
All DBs
Position
complement(2500998..2503223)
Genome browser
AA seq
741 aa
AA seq
DB search
MSNTAVLEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGALLGAQVGESLRMEGRWG
SHSQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVMADRITTHFGVDTLDIIENA
PKRLVEVPGLGPKRTKMIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYEDASISVV
KNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPERVRAGLQYALSQSSDQGHCYLPEERL
IADGVKLLQVDTGLVIECLAELAADPEGVVREKVPSPEGGEPVTAVYLVPFHRAELSLAG
QVRRLLNTGEDRMPSFQDVDWNKALAWLATRTGADLAPEQEQAVRLALTRKVAVLTGGPG
CGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLSELTGAEASTVHRLLELKPGGDAAYD
RDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLRDLLAE
GGPVPAVRLTQIFRQAQQSGVVTNAHRINAGQHPVTEGMNDFFLFVEDETEDAGKLAVDV
AARRIPAKFGLDPRRDVQVLAPMHRGPAGAGHLNGLLQQVITPGRPDLPEKRFGGRVFRV
GDKVTQIRNNYDKGENGVFNGTVGVVTALDPDEQTLTVRTDEDEEVGYDFDELDELAHAY
AMTIHRSQGSEYPAVVVPVTTGAWMMLQRNLLYTAVTRARKLVVLVGSRKAIGQAVRTVS
AGRRCTALDFRLRGGSGEDFA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacactgcggtcctcgaaggggtcctggagcggatcacctacgccaacgaggag
aacgggtacacggtcgcccgggtcgacaccggccgcggagccggcgacctgctcaccgtg
gtcggcgcgctgctcggggcgcaggtgggcgagtcgctgcggatggagggccgttggggc
tcgcactcccagtacggcaagcagttcaccgtggagaactacaccaccgtgctgcccgcc
accatccagggcatccgccgctacctcggctccgggctgatcaagggcatcgggccggtg
atggccgaccggatcaccacccacttcggcgtcgacaccctcgacatcatcgagaacgcg
ccgaagcggctcgtcgaggtccccggcctcggccccaagcgcacgaagatgatcgcggcg
gcctgggaggagcagaaggcgatcaaggaggtcatggtcttcctccagggtgtcggcgtc
tccacctccatcgccgtgcgcatctacaagaagtacgaggacgcctcgatctccgtcgtg
aagaaccagccctaccggctggccgccgacgtctggggcatcggcttcctcaccgccgac
cggatcgcccaggccgtcggcatcccgcacgacagtcccgaacgggtcagggcgggcctg
cagtacgccctgtcccagtcctccgaccagggccactgctacctccccgaggagcggctg
atcgcggacggcgtcaagctgctccaggtcgacaccgggctggtcatcgagtgcctggcc
gaactggccgccgaccccgagggcgtcgtacgggagaaggtgccgtcccccgagggcggc
gagccggtcacggcggtctatctggtccccttccaccgggccgagctgtccctcgccggg
caggtccggcggctgctgaacaccggcgaggaccggatgccctccttccaggacgtggac
tggaacaaggcgctggcctggctcgccacccgtacgggggccgacctcgcgcccgaacag
gagcaggccgtacggctcgcgctcacccgcaaggtggccgtcctgaccggcgggcccggc
tgcggcaagtcgttcaccgtccggtcgatcgtcgagctggcgcgggcgaagaaggccaag
gtggtgctcgccgcccccaccgggcgggccgccaaacggctctccgagctgaccggggcc
gaggcgtccaccgtgcaccggctgctggagctgaagccgggcggggacgcggcgtacgac
cgcgaccgcccgctcgacgccgatctcgtcgtcgtcgacgaggcttccatgctcgatctg
ctcctcgccaacaagctcgtgaaggccgtggcacccggtgcccacctcctcctcgtgggc
gacgtcgaccagctgccgtcggtcggcgcgggggaggtgctgagggacctgctcgcggag
ggcgggcccgtccccgccgtccggctcacccagatcttccgccaggcccagcagtccggc
gtcgtgaccaacgcgcaccggatcaacgccggacagcacccggtcaccgagggcatgaac
gacttcttcctcttcgtggaggacgagacggaggacgccggaaagctcgccgtcgatgtg
gcggcccgccggattccggccaagttcggcctcgacccccgtcgtgacgtgcaggtcctc
gccccgatgcaccggggcccggccggcgccggccacctgaacgggctgctccagcaggtc
atcaccccgggccgccccgacctccccgagaagcggttcggcggccgtgtcttccgggtc
ggcgacaaggtcacccagatccgcaacaactacgacaagggcgagaacggcgtcttcaac
ggcaccgtcggcgtcgtcaccgccctcgaccccgacgagcagacgctcaccgttcgcacc
gacgaggacgaggaggtgggctacgacttcgacgagctggacgagctggcccacgcctac
gccatgaccatccaccgctcccagggcagtgagtatccggccgtcgtcgtccccgtcacc
accggcgcctggatgatgctccagcggaatctgctctacacggccgtgaccagggccagg
aagctcgtcgtcctcgtcggctctcgtaaggcgatcggccaggccgtccgcacggtttcc
gcaggcaggcgctgcacagcgctggatttccggctccggggcggctccggagaagacttc
gcgtga
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integrated database retrieval system
