Streptomyces californicus: I6J39_15115
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Entry
I6J39_15115 CDS
T07611
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
scal
Streptomyces californicus
Pathway
scal03030
DNA replication
scal03430
Mismatch repair
scal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J39_15115
03430 Mismatch repair
I6J39_15115
03440 Homologous recombination
I6J39_15115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scal03032
]
I6J39_15115
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_15115
Enzymes [BR:
scal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6J39_15115
DNA replication proteins [BR:
scal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6J39_15115
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6J39_15115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_5
RNA_helicase
AAA_22
RuvB_N
Mg_chelatase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QRV28485
LinkDB
All DBs
Position
complement(3481875..3483080)
Genome browser
AA seq
401 aa
AA seq
DB search
MTVWDDLVGQDRVQEQLAAAAKDADALVTAASGGEPLDQGSKMTHAWLFTGPPGSGRSTA
ARAFAAALQCTSPDRAMGGAPGCGFCDGCHTSLIGTHADVEVIRTDLLSIGVKETRDLVR
RAQLSPAVGRWQIIVMEDADRLTEGAGNVLLKAVEEPAPRTVWMLCAPSLEDVLPTIRSR
CRHLTLSTPPVEAVADVLIRRDGIDPERAHAAARATQGHIGRARRLATDERARARRAAVL
KVPLRVADVGGCLKAAQELIDTSTEDAKQLAEEVDAKETEDLKAALGGVAGGRMPRGTAG
AMKELEDKQKRRKTRTQRDSLDLALTELTGFYRDVLALQLGSKLAIANTDVQDSLDRIAE
SSTPAQTLRRIESVIACREAMDRNVAPLLAVEAMTMALRAG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtatgggacgacctggtcggacaggaccgagtgcaggaacagctcgccgctgcc
gccaaggacgccgatgcgctggtcaccgccgcgtcgggcggtgagccgctggaccagggc
tcgaagatgacgcacgcctggctgttcaccggaccgcccggttccggacggtccacggcg
gccagggccttcgccgcggcgctccagtgcaccagcccggaccgggccatgggcggtgcg
ccgggctgcgggttctgcgacggctgccacaccagcctgatcggtacgcacgccgacgtc
gaggtcatccgcacggacctgctctccatcggcgtgaaggagacccgcgacctggtccgc
cgcgcgcagctctcccctgcggtcgggcgatggcagatcatcgtcatggaggacgccgac
cgcctcaccgagggcgcgggcaacgtcctgctgaaggccgtcgaggagcccgcgccgcgc
acggtctggatgctgtgcgccccctcgctcgaagacgtcctgcccacgatccgctcccgc
tgccgccacctgaccctgagcaccccgccggtggaggccgtggccgacgtcctcatccgc
cgcgacggaatcgaccccgagcgggcgcacgcggcggcgcgcgccacccaggggcacatc
gggcgggcccgccgtctcgccacggacgagcgggcgcgggcacggcgggccgcggtgctg
aaggttccgctgcgtgtggcggacgtgggcggctgcctcaaggcggcccaggagctgatc
gacacgtccaccgaggacgccaaacagctcgcggaggaggtcgacgcgaaggagaccgag
gacctcaaggcggcgctcggcggggtggcgggcggccggatgccgcgcggtacggcgggg
gcgatgaaggagctggaggacaagcagaagcgccggaagacgcgtacgcagcgcgacagc
ctggacctggcgctgaccgagctgaccgggttctaccgcgatgtgctggcgctccagctc
ggttcgaagctggcgatcgccaacaccgacgtacaggactccctcgaccggatcgcggag
tcctccacgccggcgcagaccctgcgcaggatcgagtcggtgatcgcctgccgggaggcg
atggaccgcaatgtggcgccgctgctggcggtggaggcgatgacgatggcgctgcgggcg
ggctga
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