Streptomyces californicus: I6J39_16175
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Entry
I6J39_16175 CDS
T07611
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
scal
Streptomyces californicus
Pathway
scal00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
I6J39_16175 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scal01007
]
I6J39_16175 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scal03016
]
I6J39_16175 (trpS)
Enzymes [BR:
scal01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
I6J39_16175 (trpS)
Amino acid related enzymes [BR:
scal01007
]
Aminoacyl-tRNA synthetase
Class I (G)
I6J39_16175 (trpS)
Transfer RNA biogenesis [BR:
scal03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
I6J39_16175 (trpS)
Prokaryotic type
I6J39_16175 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
QRV28672
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All DBs
Position
complement(3725892..3727013)
Genome browser
AA seq
373 aa
AA seq
DB search
MTTTAVTTTAVTTEPVHAEAAAATDPATAGATGPGSTADLERRIAEDPAAFRVLTGDRPT
GPLHLGHYFGSLLNRVRLQDLGVDVIVLIPDYQVITDRDTADRLGEYTDGLLLDYLALGL
DPARSTVFCHSAVPALNQLMLPFLSLVSVAELNRNPTVKDEIAHSRQSTVSGLMLTYPVH
QAADILACKGNVVPVGRDQAPHLEVTRTIARRFNERYGRVFPEPDIMLSAAPLLLGTDGT
KMSKSRANSIPLSATADETARLVKGATTDADRHITYDPDARPNVSSLVLLASLCLDRDPY
EVAAEIGGGGAAALKRTVTDAVNGHLAPFRARRAEYAKDLAYVRSVLRAGNERANALAEA
TLDEVREAMGAFR
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccgcagtgaccaccaccgccgtgaccaccgaacccgtccacgccgaggcc
gcagcggccaccgaccccgccaccgcgggggccaccggccccggcagcaccgccgacctg
gagcgccgcatcgccgaggaccccgccgccttccgggtcctcaccggcgaccgccccacc
ggccccctccacctcggccactacttcggctccctgctcaaccgggtccgcctccaggac
ctcggcgtggacgtcatcgtcctcatccccgactaccaggtcatcaccgaccgggacacg
gccgatcggctcggggagtacaccgacggactcctcctggactacctggccctcggcctc
gaccccgcccgctccaccgtcttctgccacagcgccgtccccgcgctcaaccagctcatg
ctgcccttcctcagcctcgtctccgtcgcggagctgaaccgcaaccccaccgtcaaggac
gagatcgcgcactccaggcagtcgacggtcagcgggctgatgctcacctacccggtccac
caggccgccgacatcctggcctgcaagggcaacgtggtgccggtcggccgggaccaggcg
ccccacctggaggtcacccggacgatcgcccgccgcttcaacgagcggtacggccgggtc
ttcccggaaccggacatcatgctctccgccgcgcccctgctcctcggcacggacggtacg
aagatgagcaagagccgcgccaactccatcccgctctccgccaccgccgacgagaccgcc
cgcctcgtcaagggcgcgaccacggacgccgaccggcacatcacctacgacccggacgcc
cgccccaacgtctcctccctggtgctgctggcctccctctgcctggaccgggacccgtac
gaggtcgcggcggagatcggcggcggcggggcggccgcgctcaagcggacggtgaccgac
gcggtcaacggccacctggccccgttccgcgcccgccgggcggagtacgcgaaggacctg
gcgtacgtacggtcagtgctccgcgcgggcaacgagcgggccaatgccctggcggaggcc
acgctggacgaggtgcgggaggccatgggcgccttccggtag
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