Streptomyces californicus: I6J39_16270
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Entry
I6J39_16270 CDS
T07611
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
scal
Streptomyces californicus
Pathway
scal00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
I6J39_16270 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scal01007
]
I6J39_16270 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scal03016
]
I6J39_16270 (aspS)
03029 Mitochondrial biogenesis [BR:
scal03029
]
I6J39_16270 (aspS)
Enzymes [BR:
scal01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
I6J39_16270 (aspS)
Amino acid related enzymes [BR:
scal01007
]
Aminoacyl-tRNA synthetase
Class II (A)
I6J39_16270 (aspS)
Transfer RNA biogenesis [BR:
scal03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
I6J39_16270 (aspS)
Prokaryotic type
Other AARSs
I6J39_16270 (aspS)
Mitochondrial biogenesis [BR:
scal03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
I6J39_16270 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QRV28689
LinkDB
All DBs
Position
complement(3750197..3752008)
Genome browser
AA seq
603 aa
AA seq
DB search
MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPANE
ALAKLTKETVVRIDGTVSARGADNVNPELPTGEIEIEVSEVEVLGEAAPLPFTINTEDGV
NEERRLEYRFLDLRRERMHRNIMLRSAVIAAIRAKMVALGFNEMATPILTATSPEGARDF
VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE
MSFVEQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV
DISDVFADSGFKAFAGKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWVRVGEDGT
LAGPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVEAAKRAGHFEEG
VFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLADLEEKDPLDILAWQYDIVCNGIE
LSSGAIRNHEPELMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGIAPGVDRIVMLL
ADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELNIQLRKPVAAKGAAEKPAAEKPA
PEK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggtacaggtcccacacctgcggcgagctccgcgcctctgacgtcggcaccgac
gtccggctgagcggctggctgcacaatcgccgagacctgggcggcatcctcttcatcgat
ctgcgcgaccactacggtctggtgcagctggtggcccgccccggcacccccgccaacgag
gcgctggcgaagctcaccaaggagaccgtcgtccggatcgacggcacggtctccgcgcgc
ggcgccgacaacgtcaacccggagctgccgaccggcgagatcgagatcgaggtctccgag
gtcgaggtgctcggcgaggcggccccgctgccgttcacgatcaacaccgaggacggcgtc
aacgaggagcggcgcctggagtaccgcttcctcgacctgcgccgcgagcgcatgcaccgc
aacatcatgctgcgctcggccgtgatcgccgcgatccgcgccaagatggtggccctcggc
ttcaacgagatggcgaccccgatcctcaccgcgacctcccccgagggcgcccgtgacttc
gtcgtcccgtcccggctgaaccccggcaagttctacgcgctgccgcaggccccgcagcag
ttcaagcagctgctgatgatctcgggcttcgaccgctacttccagatcgcgccctgcttc
cgcgacgaggacgcccgcgcggaccgctcgccgggcgagttctaccagctcgacgtggag
atgtcgttcgtcgagcaggaggacgtcttccagccgatcgagaagctgatgaccgagctc
ttcaccgagttcggcaacggccgcgaggtcacctcgccgttcccgcgcatcccgttccgc
gagtcgatgctgaagtacggcaacgacaagccggacctgcgcgccaagctggagctcgtc
gacatctcggacgtcttcgccgactccgggttcaaggcgttcgccggcaagcacgtccgc
gcgctgcccgtcccggacaccgcgggccagtcccgcaagttcttcgacggcctcggcgag
tacgcggtcgagcacggcgccaagggcctggcctgggtgcgggtgggcgaggacggcacg
ctggccggcccgatcgccaagttcctcaccgagaccgacgtgaagacgctcaccgagcgg
ctctcgctggtcccgggccacgccgtcttcttcggcgcgggcgagttcgacgaggtctcc
aagatcatgtcggcggtccgcgtcgaggccgccaagcgcgccggccacttcgaggagggc
gtcttccggttctgctggatcgtcgacttcccgatgtacgagaaggacgaggagaccggg
aagatcgacttctcgcacaacccgttctcgatgcctcagggcggcctcgccgacctggag
gagaaggacccgctcgacatcctcgcctggcagtacgacatcgtctgcaacggcatcgag
ctgtcctcgggcgccatccggaaccacgagcccgagctgatgctcaaggcgttcgagatc
gccggctacgaccgcgagaccgtcgagcacgagttcgcgggcatgctccgcgcgttccgg
ctcggcgctcctccgcacggcggcatcgccccgggcgtcgaccgtatcgtgatgctgctc
gccgacgagccgaacatccgcgagacgatcgccttcccgctcaacggcaacgcccaggac
ctgatgatgggcgccccgaccgagctggacgagacccggctgcgtgagctgaacatccag
ctccgcaagccggtcgccgccaagggcgcggcggagaagccggcggcggagaagcccgcc
ccggagaagtag
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