Streptomyces californicus: I6J39_16775
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Entry
I6J39_16775 CDS
T07611
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
scal
Streptomyces californicus
Pathway
scal03030
DNA replication
scal03430
Mismatch repair
scal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J39_16775 (ssb)
03430 Mismatch repair
I6J39_16775 (ssb)
03440 Homologous recombination
I6J39_16775 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scal03032
]
I6J39_16775 (ssb)
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_16775 (ssb)
03029 Mitochondrial biogenesis [BR:
scal03029
]
I6J39_16775 (ssb)
DNA replication proteins [BR:
scal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I6J39_16775 (ssb)
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
I6J39_16775 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
I6J39_16775 (ssb)
Mitochondrial biogenesis [BR:
scal03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
I6J39_16775 (ssb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
NovG_helical
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QRV28779
LinkDB
All DBs
Position
3854830..3855336
Genome browser
AA seq
168 aa
AA seq
DB search
MALPTMTGVGRLTNDPELRFTPNGKAVASVPLAFNSRKLNRQTQEWEDGDVLYVRGSAWE
RLAENLVETLAKGMEVIVTGELRTESWEKDGQKHERTALLIRSIAPSLVFATAKVTKVTT
GQNGGQGGGQARGQAQQRRPQQSRPTQPPADDPWAIDNARGHSDEPPF
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcccaccatgaccggcgtcggccgcctcacgaacgacccggaactccgcttc
accccgaacggcaaagccgtcgcgtccgtgccgctcgcgttcaacagccggaagctgaac
cgccagacgcaggagtgggaggacggcgacgtcctgtacgtccgcggttcggcgtgggag
cgcctggcggagaacctcgtcgagaccctggcgaagggcatggaggtgatcgtcacgggc
gagctccggacggagtcctgggagaaggacggtcagaagcacgagcggacggccctgctg
atccgctcgatcgccccgtcgctggtgttcgccaccgccaaggtcaccaaggtcacgacc
gggcagaacggcgggcagggaggcggacaggcgcgcgggcaggcccagcagcgccgaccc
cagcagtcccgcccgacccagcccccggccgacgacccctgggccatcgacaacgcccgc
ggccacagcgacgagcccccgttctga
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