Streptomyces californicus: I6J39_17605
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Entry
I6J39_17605 CDS
T07611
Name
(GenBank) PAS domain-containing protein
Organism
scal
Streptomyces californicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Response_reg
PAS_7
HisKA
PKK
Motif
Other DBs
NCBI-ProteinID:
QRV28933
LinkDB
All DBs
Position
complement(4017683..4022218)
Genome browser
AA seq
1511 aa
AA seq
DB search
MSSRPSRGTARLAAILDALPDGLLLVNCNGTVVNANAIALEMFETPGAALVGRGLLDLLP
EFDSRLIPGSMRRPETTDEHGRTKPARMTARRTDRHEYPVEVTSASLDSGQAAYNDIHSS
YTGDELLMIVVRDLSGTVDTEAELARSQRQTEMILRAASEGVVGTDTDGRVVLVNPAAAQ
ILGFRASDLGGQELHPLILHSRAEGEPFPYEESPLADTLKSGRKHRVRGQVLWSKSGARV
PVDLTTAPVRDGDQLVGAVMTFTDRRPYEELSAQHRSVVAELTASHDAEVTALKEAHTAE
LEALKEAHTAELADRSERYAAEIEGQAELLASLGAQHAQLTAVLGRSLRGPLEELRGELS
ALASDPAGQLWPEANQILHHLAAGYARMTTLVDNVLGFQRLDAGVEGLHKAPALVEGIVK
GGIDGAVELIGPGRAQFAVHAPPIEAEVDARQLATAIAHLVADVCGVDATGKARAVPGGG
YVDTTVVVAAAQRGDAVRIEVRGPYAGGDPVHEPLVRGIVRAHGGVLQTHEMPGMSGSAY
VLDVPIGAASGTIAPPVADGAGPAPEPAAAPAASSPSEGVGAPGVTSGGRRRARRSSTDA
FLDGPDGTAESIGDDATGAVPASPDDRPDAEPTGRRRARRGPAASEGQAPELIPAQQGEG
SGRRRGRPSPAEAAPAPGTAAEGPAAAAPEQREAQPRRSALALAPAPSASSGPSAHPGSA
GSSASAEPSSPAGPSGGAAVTGTENARSTGRPELGPPVPPQGAPAGPQQAVPSQGVPTGP
QQPVPPRGVTAGPQQPVPPQGLPVAPVDPQQPVPPTGRRARREGENLALPALASGSGDAP
EDRPGQEPSAPGPQQPGGRRARRALAAAQERAAADAGPRTAFALPPADADRSPGAPDAPA
GPDHGTSAHHARTAPEAGYTPPQAHPIAPPNLAPQPNGAPAQGTPAHGTARHGAPAAPHT
VGTPPQPGTPAPAAGTPGTGEPATPGAAPDHAAWGDDAEGARTGAEHSPRTGVGPTAHAT
GTTSVAEPAGHPADGDAGAPGARRQPLPAEERMPEGVHPDSTQGRAFSVRTLGQGVPFAQ
HLAHQQNQPYQGVGGAGRRRKLAAPPEDDRAPARPGGGQQAPDLRPGTGRPAPNQGAGAQ
QPGAQQPGARQEQPGGATAPASPRGTGQNPDQPGQDKAQGPFPAQEPTAPARSGQSQGQP
GQPGQPGQNAATGTSTAYGEGQLIAAPVAEGRAYAIGAPDEGAEGPEPLDGPGGAVEVAN
RPHPQPMDDELPPEPLDNPRRLLVWPAPDVPTQQALSDRGYRPVIVNSREEVDAQIAAFP
AALFVDPLTGPITRTALQSLRQAAVAAEVPVLVTAGLGQATREAAYGADPAVLLKALAPR
DSEQHPPRVLLIEEHEEIAAALTQTLERRGMQVARAAADSEAVELAGRMRPNLVVIDLMQ
VRRRRAGIIDWLRANGQLNRTPLVVYTSAGMDPAELPRLESGETVLFLAERSTSDEVQSR
IVDLLAKIGTN
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccgtcccgaggcactgctcgcctcgcagccatactcgatgccctcccc
gacgggctgctgctcgtcaactgcaacggcaccgtcgtcaacgccaacgccatcgccctc
gaaatgttcgagaccccgggcgccgcgctcgtcggtcgcgggctgctcgatctgctgccg
gagttcgactcccggctgatcccgggctcgatgcgccgccccgagaccacggacgagcac
ggcaggaccaagccggcgcggatgaccgcgcggcgtacggaccgccacgagtacccggtc
gaggtcaccagcgcgagcctcgacagcggccaggccgcgtacaacgacatccactccagc
tacaccggcgacgagctcctcatgatcgtcgtacgggacctctccggcaccgtggacacc
gaggcggagctggcccgttcgcaacggcagaccgagatgatcctgcgggccgcttccgag
ggcgtcgtcggcacggacaccgacgggcgcgtcgtcctcgtcaaccccgccgccgcgcag
atcctcggcttccgggccagcgatctcggcggacaggagctgcacccgctgatcctgcac
tcgcgggcggagggcgaaccgttcccttacgaggagtccccgctcgccgacaccctcaag
tcggggcgcaagcaccgggtgcgcgggcaggtgctgtggtccaagagcggcgcacgggtc
ccggtggacctgacgaccgcgccggtacgggacggggaccaactcgtcggagcggtgatg
acgttcaccgaccggcgtccgtacgaggagttgtcggcacagcacaggagcgtcgtcgcc
gagttgaccgcgagccacgacgccgaggtcaccgcgctcaaggaggcgcacaccgccgag
ctggaggcgctgaaggaggcgcacaccgccgagctcgccgaccggagtgaacggtacgcc
gcggagatcgagggccaggccgagctgctggcgtccctgggtgcccagcacgcccagctc
acggccgtcctcgggcgttcgctgcgcgggccgctggaggagctgcgcggcgagctgtcc
gcgctcgcctccgacccggccggtcagctgtggcccgaggccaaccagatcctgcaccac
ctcgccgccgggtacgcccggatgaccacgctcgtcgacaacgtcctgggcttccagcgc
ctggacgcgggcgtggaggggctgcacaaggcccccgccctggtcgaggggatcgtgaag
ggcggcatcgacggcgcggtcgagctgatcggtccgggacgcgcccagttcgccgtgcac
gccccgccgatcgaggccgaggtcgacgcgcgtcagctggccaccgccatcgcccacctc
gtcgcggacgtctgcggcgtcgacgccacgggcaaggcgcgggccgtccccgggggcgga
tacgtcgacaccaccgtcgtcgtggccgccgcccagcgcggggacgccgtacgcatcgag
gtgcgcgggccctacgcgggtggcgacccggtgcacgagccgctcgtgcgcggcatcgtc
cgggcgcacggcggggtgctccagacccacgagatgccggggatgagcggcagcgcgtac
gtcctcgacgtgcccatcggcgcggcgtccggcacgatcgcgcccccggtggcggacggg
gcgggcccggctcccgagcccgccgccgctccggccgcctcctcgccgtccgagggcgtc
ggcgctcccggcgtcaccagcggcggccgccgccgggcacggcggtcctccaccgacgcg
ttcctggacggccccgacggtacggcggagagcatcggcgacgacgcgaccggcgccgtg
cccgcctcccccgacgaccgtccggacgccgagccgaccggacggcggcgggcccgccga
gggccggccgcctccgaggggcaggcccccgaactgatcccggcccagcagggcgagggc
tcagggcgtcggcgcggccgtcccagtccggccgaggcggctcccgcccccggcacggcc
gcggaagggcccgcggccgccgcgccggagcagcgggaagctcagccgcgtcggagcgcg
ctggccctggcccccgctccgtccgcgtcctccggtccgtccgcgcaccccggctccgcc
gggtcgtccgcctccgccgaaccctcctcgcccgccgggccgtccgggggtgctgccgtc
accggcaccgagaacgcccggagcaccggccgcccggagctcggcccgcccgttccgccc
cagggggccccggccggtccccagcaggccgtgccgtcccagggagtcccgaccggccct
cagcagcccgtgccgccccggggagtcaccgccggcccccagcaacccgttcccccgcag
gggctcccggtggccccggtcgacccgcagcagcccgtgccgcccaccgggcgccgggcg
cgtcgggagggcgagaacctggccctccccgccctcgcgtccggcagcggcgacgccccc
gaggaccggccgggtcaggaaccgtccgcgcccggccctcagcagcccgggggcaggcgg
gcccggcgcgccctggccgccgcccaggagcgcgcggccgccgacgccggtccgcggacc
gccttcgccctgccgccggccgacgccgaccgctccccgggcgcgcccgacgccccggcg
ggccccgaccacgggacgagcgcgcaccacgcgcgcaccgcaccggaggccggctacacc
ccgccccaggcacaccccatcgccccgccgaacctcgccccgcagccgaacggcgccccg
gcccagggcactcccgcccacgggaccgcccgccacggcgcgcccgccgcgcctcacacc
gtcggcacaccgccgcagcccgggacgccggcccccgccgccgggacgcccggcaccggc
gaaccggcgaccccgggcgcggctccggaccacgccgcgtggggcgacgacgccgagggc
gcccgtaccggcgccgagcacagcccccgtaccggcgtcggcccgaccgcgcacgccacc
gggaccacgtccgtcgccgaaccggcggggcacccggccgacggtgacgcaggcgccccg
ggcgcgcggcggcagccgctgccggccgaggagcggatgccggagggcgtgcaccccgac
tcgacgcaggggcgggcgttcagcgtgcggacgctcggccagggcgtgccgttcgcccag
catctcgcacaccagcagaaccagccgtaccagggcgtcggcggggccggccgacgacgc
aagctcgccgctccgccggaggacgaccgcgccccggcccggcccggcggcggccagcag
gcaccggacctccggcccggcaccggccgaccggccccgaaccagggggccggcgctcag
cagcctggcgctcagcagcccggcgcgcggcaggaacagccgggcggcgccaccgcgccc
gcctccccgcgcggcaccgggcagaacccggaccagcccggtcaggacaaggcgcagggc
ccgttccccgcgcaggagccgaccgccccggctcgctcgggccagagtcagggccagccc
ggtcagcccggccagcccggtcagaacgccgccaccggcaccagcacggcctacggcgag
gggcagctcatcgcggcacccgtcgcggaggggcgcgcgtacgcgataggggcgcccgac
gagggggccgaggggccggagccgctggacggccccggtggcgcggtcgaggtcgccaac
cggccgcacccgcagccgatggacgacgagctgccgcccgagccgctggacaacccgcgc
cggctgctggtctggcccgcccccgacgtaccgacgcagcaggccctcagcgaccgcggc
taccgtccggtgatcgtgaactcccgcgaggaggtcgacgcccagatcgccgcgttcccc
gccgcgctcttcgtcgacccgctgaccgggcccatcacccgtaccgcgttgcagtcgctg
cgccaggcggcggtggcggccgaggttccggtgctggtcaccgccggtctggggcaggcg
acccgggaagcggcgtacggggccgacccggccgtcctcctcaaggcgctggccccgcgc
gacagcgaacagcaccctccgcgcgtcctcctgatcgaggagcacgaggagatcgcggca
gccctgacgcagacgctggagcggcgcgggatgcaggtggcgcgcgcggcggcggacagc
gaggccgtcgagctggcgggccggatgcggccgaacctcgtggtgattgacctgatgcag
gtacgtcgtcggcgcgccgggatcatcgactggctgcgggccaacgggcagttgaaccgc
accccgctggtcgtctacacctcggccgggatggacccggcggagctgccgcgactcgaa
tcgggggagaccgtcctcttcctcgccgagcggtccaccagcgacgaggtccagtcgcgg
atcgtcgatctgctcgcgaagatcggcaccaactga
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