Streptomyces californicus: I6J39_17785
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Entry
I6J39_17785 CDS
T07611
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scal03021
]
I6J39_17785
Transcription machinery [BR:
scal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6J39_17785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
HTH_31
HTH_24
Sigma70_ECF
MarR
DUF7343
KORA
DUF134
Motif
Other DBs
NCBI-ProteinID:
QRV28962
LinkDB
All DBs
Position
complement(4062587..4063453)
Genome browser
AA seq
288 aa
AA seq
DB search
MSEEQGSSKVLTLTKSVPAPAVLTSSPEAIDTRTLSRSLFLRLAALGPASGPEGTDSPER
TYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAM
PTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKTSDELAQKLDRSPTVPELARALGVSEE
DVVDGLAVGNAYTASSLDSPSPEDDGGEGSLADRLGYEDSALEGVEYRESLKPLLAKLAP
RERQIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLIAD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaacagggcagctcgaaggtgctcacgctcaccaagagcgtgccggcaccc
gccgtgctcaccagctcgccggaggccatcgacacccgcacgctgtcccgctccctgttc
ctgcggctcgccgcgctcggccccgcctcgggccccgagggaacggacagtccggagcgg
acctatgtgcgggacactctgatcgagctgaacctcccgctggtgcggtacgccgccgcg
cggttccgcagccgcaacgagccgatggaggacatcgtccaggtcggcacgatcggcctg
atcaaggcgatcgaccggttcgactgcgaacggggcgtcgagttcccgacgttcgcgatg
cccaccgtcgtcggcgagatcaaacgcttcttccgcgacacctcctggtccgtgcgggtc
ccccgccgcctccaggagctgcggctcgccctgaccaagaccagtgacgagctcgcgcag
aagctggaccgctcgccgaccgtgccggagctggcccgcgcgctcggggtctccgaggag
gacgtggtcgacgggctcgccgtcggcaacgcctacaccgcctcctcgctcgactccccc
tcccccgaggacgacggcggcgagggctcgctcgcggaccgcctcgggtacgaggactcc
gcgctggagggcgtcgagtaccgggagtcgctcaagccgctgctggccaagctcgccccg
cgcgagcgccagatcatcatgctgcggttcttcgcgaacatgacgcagtcgcagatcggc
gaggaggtcggcatctcccagatgcacgtctcccggctcctgacccgcacgctcgcccag
ctcagggaagggctcatcgcggactga
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