Streptomyces californicus: I6J39_17790
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Entry
I6J39_17790 CDS
T07611
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scal03021
]
I6J39_17790
Transcription machinery [BR:
scal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6J39_17790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
MarR_2
HTH_Crp_2
HTH_37
MarR
NirdL-like_HTH
HTH_3
DUF134
DUF7343
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QRV28963
LinkDB
All DBs
Position
complement(4063688..4064584)
Genome browser
AA seq
298 aa
AA seq
DB search
MPASTAPQVPPQAVQADPAILSEDVRDARDPRAETSDRPARPAKSRGADTRALTQVLFGQ
LKDLEPGTPEHRRVRAALIEANIPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDP
ERGVQFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVTGATEDLTTAHGRSPTTA
EIAERLKIAEDEVLACIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALAGVEHRDLV
RHLLVQLPEREQRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccagtacagcgcctcaagtgcctccccaggccgtccaagccgacccggcgatc
ctgtccgaggacgtccgggacgcccgggacccccgagccgagacctcggaccgccccgca
cggcccgccaagtcccggggcgccgacacccgggcgctcacccaggtcctcttcggccag
ctcaaggacctggagccgggcaccccggagcaccgccgggtccgggccgccctcatcgag
gcgaacatccccctcgtccggtacgccgccgcccgcttccgcagccgcaacgagccgatg
gaggacgtcgtccaggtcggcacgatcggcctgatcaacgccatcgaccggttcgatccg
gagcgcggggtccagttcccgacgttcgcgatgcccaccgtcgtcggcgagatcaagcgc
tacttccgcgacaacgtccgcacggtccacgtaccccgccgcctccatgaactctgggtc
caggtcaccggcgccaccgaggatctgacgaccgctcacggccgctcccccaccaccgcc
gagatcgccgagcggctgaagatcgccgaggacgaggtactggcctgcatcgaggccgga
cgctcgtaccacgcgacctccctggaggccgcccaggagggcgacgggctgccggggctg
ctcgaccggctcggctacgaggaccccgcgctcgccggcgtcgagcaccgcgacctcgta
cgccacctcctcgtccagctccccgagcgggagcagcgcatccttctcttgcgctactac
agcaacttgactcagtctcagatcagcgcggagctaggcgtctcgcagatgcatgtgtca
aggcttctcgccagaagtttcgcccgactgagatccgcaaacaggatcgaggcgtaa
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