Streptomyces californicus: I6J39_18480
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Entry
I6J39_18480 CDS
T07611
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
scal
Streptomyces californicus
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NPCBM
Sigma70_r2
zf-HC2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QRV29072
LinkDB
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Position
complement(4231032..4233050)
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AA seq
672 aa
AA seq
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MSGNEQQEEPLDEIAAAGKDTRAAGRPAGHVPVRAARGASDGEHEGGTVLPGPWPAVAED
DASGGAGAGVGPHAVPQQRAGRSGAPESGLSDARLIEDMRAGDDQAYEELFRRHSAAVLR
YARSCCRDGHTADDLTAEVFARTLQAVRGGKGPTEAVRAYLMTAVRHVAAAWTKSSKREH
LVDDFAVFAAQATRSSELSDDDTLELGADVLAMHEAEQTMAMQAFRSLPERWQAVLWHTT
VEEESPSEIAPLFGLTANATAVLAGRAREGLKQAYLQAHVSRALTTGGDCAQYADRLGAH
ARGGLRTRAERGLRKHLDECARCRVAAGELEQVNAGIPALLPVAVIGWFAAGYALKAAGV
VAGGAVGAAGAGAAAAATGSGSTGGAAGGAAASEGLGTPAKAGIAAAVTVAAAAGLVWAL
VGDDQPKPEPKPVAKPPAVAPADPTPAPEPPPPAPKPKPEPPAAPAPPAPPEPAPSEPAP
EPTPSPTPSPEPPPEPAPPAPTPPPSPSPTPTPTPPPPSKPTPPPPAPEVYQVSELPYSV
FGDRSEPEVVMGQSSWIWQRSNVSIASTRYAHGVTVHARSSVTIRLNRPCTRYEAMVGVD
DLTMGLGAARFSVFNGDGARLWRSPVMKGGDPAVPVGVDISGQSSIRLVVEPEGTFGQVA
LADWAESRISCS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtaacgagcagcaggaagagccgctcgacgagatcgctgcggccggcaaggac
acgagggcggcggggcgacccgccgggcacgtgcccgtccgggccgcacgcggcgcgtcg
gacggcgagcacgagggcggcaccgttctgcccggcccgtggcccgccgtcgccgaggac
gacgcctccggcggagccggggcgggcgtcggcccgcacgccgttccgcagcagcgcgcc
ggtcgtagcggggctcccgagtccgggctctcggacgcccggctgatcgaggacatgcgg
gccggcgacgaccaggcgtacgaggagctgttccggcgacactcggccgccgtcctccgg
tacgcccgcagctgctgccgcgacgggcataccgccgacgacctgacggccgaggtgttc
gcgcgcacgctccaggccgtacggggcgggaaggggcccacggaggcggtccgggcctac
ctgatgaccgccgtccgccatgtcgccgccgcctggacgaagagctccaagcgcgagcac
ctggtcgacgacttcgcggtgttcgccgcgcaggccacccgctcctcggagctctccgac
gacgacaccctcgaactcggcgccgacgtcctggcgatgcacgaggccgagcagacgatg
gcgatgcaggcgttccggagccttccggagcgctggcaggcggtgctgtggcacaccacc
gtggaggaggagtcgccgagcgagatcgccccgctgttcggcctcaccgccaacgccacc
gccgtgctggccggccgggcccgcgaagggctcaagcaggcatacctccaggcccacgtc
agccgggcgctcaccaccggcggggactgcgcgcagtacgccgaccggctcggcgcgcac
gcccggggcggcctgcgcacccgcgccgaacgcggtctgcgcaagcacctcgacgagtgc
gccaggtgccgggtggccgcgggcgagctggaacaggtgaacgccgggattccggcgctg
ctgcccgtcgcggtcatcgggtggttcgccgccggatacgcgctcaaggcagccggcgtg
gtggccggcggcgcggtcggggcggccggggcgggcgccgccgcggcggccaccgggtcc
ggttcgaccggcggggccgccgggggcgctgcggcctccgaggggctcggcacgcccgcc
aaggccgggatcgccgccgccgtgaccgtggccgccgcggccggactggtgtgggcgctc
gtcggcgacgaccagccgaagccggagcccaagccggtcgccaagccgccggccgtggcg
ccggcggatcccacgcccgcgcccgagcccccgccgccggctccgaagccgaagcccgaa
ccgccggcggcccccgcaccgcccgcgcccccggagccggccccgtccgagccggccccg
gagccgacgccgagccccacgccctcccccgagccgccgccggagcccgcgccgcccgcg
ccgactccgccgccgtccccctctccgacgccgacgccgacgccgccccctccgtctaag
cccaccccgccgccgcccgcgccggaggtgtaccaggtcagcgagttgccgtactccgtc
ttcggggaccgcagcgagccggaggtggtgatggggcagagcagttggatctggcagcgg
tccaacgtgtcgatcgcctccacccggtacgcgcacggggtgaccgtgcacgcccgctcc
tcggtgaccatccggctcaaccggccgtgcacccgctacgaggccatggtcggggtggac
gatctgacgatgggtctcggcgcggcgcgcttctccgtgttcaacggagacggggcgcgg
ctgtggcgctccccggtgatgaagggcggcgaccccgccgtcccggtcggcgtggacatc
tccggccagtcctcgatccgcctggtggtggagcccgagggaacgttcggccaggtggcg
ctcgccgactgggcggagtcccggatcagctgctcctga
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