Streptomyces californicus: I6J39_21625
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Entry
I6J39_21625 CDS
T07611
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scal03016
]
I6J39_21625 (truA)
Enzymes [BR:
scal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
I6J39_21625 (truA)
Transfer RNA biogenesis [BR:
scal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I6J39_21625 (truA)
Prokaryotic type
I6J39_21625 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QRV29610
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All DBs
Position
4889564..4890418
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AA seq
284 aa
AA seq
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MSDEAEPGFVRVRLDLSYDGKDFSGWAKQTSRRTVQGEIEDALRTVTRSAVTYDLTVAGR
TDAGVHARGQVAHVDLPEAVWAEHEEKLLRRLSGRLPQDVRIWRAAPAPAGFNARFSALW
RRYAYRVGDRPGGVDPLTRGHVLWHDRPLDVDAMNEAAAPMVGEHDFAAYCKKREGATTI
RTLQKLSWVRDAESGVLTATVQADAFCHNMVRALIGAALFVGDGRRPASWPAEVLAAKVR
DPGVHVVRPHGLTLEEVAYPADELLAARAVEARNVRTLPGAGCC
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacgaggccgagcccggtttcgtacgggtacgactggacctgtcctacgacggc
aaggacttctccggctgggcgaagcagaccagccggcgcacggtgcagggggagatcgag
gacgcgctgcggaccgtgacccgctcggcggtgacgtacgacctgacggtggcgggccgt
acggacgccggggtgcacgcacgcgggcaggtggcgcacgtggacctgccggaggcggtc
tgggcggagcacgaggagaagctgctgcggcggctgtcgggccggttgccgcaggacgta
cggatctggcgcgcggcccccgcacccgccgggttcaacgcccgcttctccgcgctgtgg
cggcgctacgcctaccgggtgggcgaccggcccggcggggtggatccactgacgcgcggt
catgtgctgtggcacgaccggccgttggacgtggacgcgatgaacgaggcggccgcgccg
atggtgggggagcacgacttcgccgcgtactgcaagaagcgcgagggcgcgacgaccatc
cggacgctccagaagctgagttgggtacgggacgcggagtccggggtgctcaccgcgacc
gtgcaggcggacgccttctgccacaacatggtgcgggcgctgatcggggccgcgctcttc
gtcggcgacgggcggcggccggcctcctggcccgccgaggtgctggcggcgaaggtgcgc
gaccccggggtgcacgtggtgcggccgcacgggctgacgctggaggaagtggcctacccg
gccgatgagttgctggcggcgcgggccgtggaggcgcgcaacgtacggacgctgccgggg
gcgggctgctgctga
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