Streptomyces californicus: I6J39_21845
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Entry
I6J39_21845 CDS
T07611
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
scal
Streptomyces californicus
Pathway
scal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6J39_21845 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scal03019
]
I6J39_21845 (groL)
03110 Chaperones and folding catalysts [BR:
scal03110
]
I6J39_21845 (groL)
03029 Mitochondrial biogenesis [BR:
scal03029
]
I6J39_21845 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scal04147
]
I6J39_21845 (groL)
Enzymes [BR:
scal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
I6J39_21845 (groL)
Messenger RNA biogenesis [BR:
scal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
I6J39_21845 (groL)
Chaperones and folding catalysts [BR:
scal03110
]
Heat shock proteins
HSP60 / Chaperonin
I6J39_21845 (groL)
Mitochondrial biogenesis [BR:
scal03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
I6J39_21845 (groL)
Exosome [BR:
scal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
I6J39_21845 (groL)
Exosomal proteins of other body fluids (saliva and urine)
I6J39_21845 (groL)
Exosomal proteins of breast cancer cells
I6J39_21845 (groL)
Exosomal proteins of colorectal cancer cells
I6J39_21845 (groL)
Exosomal proteins of bladder cancer cells
I6J39_21845 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QRV29644
LinkDB
All DBs
Position
4934247..4935872
Genome browser
AA seq
541 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
LDDPYENLGAQLVKEVATKTNDVAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSEELLATARPIDDKSDIAAVAALSAQDTQVGELIADAMDKVGKDGVITVEESNT
FGLDLEFTEGMAFDKGYLSPYMVTDQERMEAVLDDPYILIHQGKIGSIQELLPLLEKVIQ
AGGSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDIATLTGATV
IAEEVGLKLDQAGLDVLGTARRVTVSKDDTTIVDGGGNAEDVKGRVNQIKAEIESTDSDW
DREKLQERLAKLAGGVCVIRVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSAIV
HAVKVLEGNLGKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVADLDKGQGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKPAEEEADAGHGGHGHS
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattcttaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgctcccaccatcaccaacgacggtgtcaccatcgcgcgcgaggtcgag
ctcgacgacccgtacgagaacctgggcgcccagctcgtcaaggaggtggcgaccaagacc
aacgacgtagcgggtgacggcaccaccaccgcgaccgtcctggcccaggcgctcgtccgc
gagggcctgcgcaacgtcgccgccggcgcctccccggccgccctgaagaagggcatcgac
gccgccgtcaaggccgtgtccgaggagctcctcgcgaccgcccgcccgatcgacgacaag
tccgacatcgccgccgtggccgcgctctccgcgcaggacacccaggtcggcgagctcatc
gcggacgcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggcctggacctggagttcaccgagggcatggccttcgacaagggctacctgtccccg
tacatggtgaccgaccaggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
caccagggcaagatcggctccatccaggagctgctcccgctgctggagaaggtcatccag
gccggcggctccaagccgctcctgatcatcgccgaggacgtcgagggcgaggcgctctcc
accctcgtcgtcaacaagatccgcggcaccttcaacgccgtcgcggtgaaggccccgggc
ttcggcgaccgccgcaaggccatgctcggcgacatcgccaccctcaccggtgcgaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctggacgtgctcggcaccgcc
cgccgcgtcaccgtctccaaggacgacacgaccatcgtcgacggcggcggcaacgccgag
gacgtcaagggccgcgtcaaccagatcaaggccgagatcgagtccacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtcatccgg
gtcggcgccgccaccgaggtggagctcaaggagaagaagcaccgcctcgaggacgccatc
tccgccacccgcgccgcggtcgaggagggcatcgtctccggcggtggctccgccatcgtc
cacgccgtgaaggtcctggagggcaacctcggcaagaccggcgacgaggccaccggtgtc
gcggtcgtccgccgcgccgccgtcgagccgctgcgctggatcgccgagaacgccggcctg
gagggctacgtcatcacctccaaggtcgccgacctcgacaagggccagggcttcaacgcc
gccaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgcgctggagaacgccgcgtccatcgcgtcgctgctgctcacgaccgagaccctg
gtcgtcgagaagccggccgaggaggaggccgacgccggtcacggcggccacggccactcc
cactag
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