Streptomyces californicus: I6J39_22010
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Entry
I6J39_22010 CDS
T07611
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scal
Streptomyces californicus
Pathway
scal03420
Nucleotide excision repair
scal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6J39_22010 (pcrA)
03430 Mismatch repair
I6J39_22010 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_22010 (pcrA)
Enzymes [BR:
scal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6J39_22010 (pcrA)
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6J39_22010 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
I6J39_22010 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
ResIII
DEAD
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QRV29676
LinkDB
All DBs
Position
4980232..4982670
Genome browser
AA seq
812 aa
AA seq
DB search
MSSLFDDSFLTGLQSSEDGPPPPPEDHAPEEVPEGLFESVYDAPPPPRDGYYRDGHPRPA
VDPAALLDGLNTEQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAHLLAERGTHPGQILAI
TFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAADSK
RLMALVCRDLDLDPKRYPPKSFTAKVSNLKNELIDEETFAGQAADGFEKTLAQAYALYQA
RLREANALDFDDIIMTTVHLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLVRELVGP
AGENDAPAELCVVGDADQSIYAFRGATIRNILQFEEDYPNATTILLEQNYRSTQTILSAA
NAVIERNESRRPKNLWTNAGSGARITGYVADTEHDEAQFVADEIDRLTDAGDAKAGDVAI
FYRTNAQSRVFEEILIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDTVPLRRILN
VPKRGIGDRAEAMIDALSMREKISFPQALRRVDEAYGMAARSSNAVKRFNTLMEELRTIV
ESGAGPAVVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQERGDEEGAGT
LAEFLEKVALVADSDQIPDEEEDGSGVITLMTLHTAKGLEFPVVFLTGLEDGVFPHMRAL
GQTKELEEERRLAYVGITRARERLYLTRAAMRSAWGQPSYNPPSRFLEEIPEQHLDWRRK
GPMAAPAGPTSGITSSLSSSRSRSGPSGFATRRGAEKPTVALAVGDRVTHDQFGLGTVTA
VEGHGDQAKATVDFGDERPKKLLLRYAPVEKL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagtttcctgaccggcctccagtcctcggaggacggcccg
ccgccgccccccgaggaccacgcgcccgaggaggtgccggagggactcttcgagagcgtc
tacgacgcgcccccgccgccccgggacgggtactaccgggacggccacccgcgcccggcg
gtcgaccccgccgctctgctcgacgggctgaacaccgagcagcgcgccgccgtcgtccac
gccgggtccccgctgctcatcgtggccggggccggctccggcaagacccgggtgctcacc
caccgcatcgcccacctgctggccgagcgcggcacccaccccgggcagatcctcgcgatc
accttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgaacagctcgtgggcccg
cgcgccaacgccatgtgggtcatgaccttccacagcgcgtgcgtgcgcatcctgcgccgc
gagtcgaagaagctcggcttcacctcgtcgttctcgatctacgacgccgccgactccaag
cggctgatggccctggtctgccgcgatctggacctggaccccaagcgctacccgccgaag
tccttcaccgccaaggtctccaacctcaagaacgagctcatcgacgaggagaccttcgcc
gggcaggccgccgatggcttcgagaagacgctggcccaggcgtacgcgctctaccaggcg
cggctgcgcgaggccaacgccctggacttcgacgacatcatcatgaccacggtccacctg
ctccaggcgttcccggacgtcgccgagcactaccgccgccgcttccgccacgtcctcgtc
gacgagtaccaggacaccaaccacgcccagtacacgctggtccgcgagctggtcggcccg
gccggggagaacgacgcacccgccgagctgtgcgtggtcggcgacgcggaccagtcgatc
tacgccttccggggcgcgaccatccgcaacatcctccagttcgaggaggactacccgaac
gcgacgacgatcctcctggagcagaactaccgctccacacagacgatcctctccgccgcc
aacgccgtcatcgaacgcaacgagagccgccgccccaagaacctgtggaccaacgccggc
tccggcgcccgcatcaccggctacgtcgcggacaccgagcacgacgaggcccagttcgtc
gcggacgagatcgaccggctgaccgacgcgggcgacgccaaggccggcgacgtcgcgatc
ttctaccgcaccaacgcccagtcgcgtgtcttcgaggagatcctcatccgcgtcggcctg
ccctacaaggtcgtcggcggcgtgcgcttctacgagcgcaaggaggtccgggacgtcctg
gcctacctccgcgtcctcgccaaccccgaggacaccgtcccgctccgccgcatcctcaac
gtgcccaagcgcggcatcggcgaccgcgccgaggccatgatcgacgccctctcgatgcgc
gagaagatctccttcccgcaggccctgcgccgcgtcgacgaggcgtacggcatggccgcc
cgctcgtccaacgcggtcaagcgcttcaacacgctgatggaggagctgcgcacgatcgtc
gagtccggcgccgggcccgccgtcgtactggaagccgtgctggagcgtacgggctacctc
gccgagctccaggcgtccaccgacccgcaggacgagacccggatcgagaacctccaggaa
ctcgccgccgtcgccctggagttcgagcaggagcgcggcgacgaagagggtgcgggcacc
ctcgccgagttcctggagaaggtcgccctcgtcgcggactccgaccagatccccgacgag
gaggaggacggctccggggtcatcacgctgatgacgctgcacacggcgaagggcctggag
ttccccgtcgtcttcctcaccggcctggaggacggcgtcttcccgcacatgcgcgccctc
ggccagaccaaggagctggaggaggagcgccgcctcgcctacgtcggcatcacccgcgcc
cgcgaacggctctacctgacccgcgccgcgatgcgcagcgcctgggggcagccctcgtac
aacccgccctcgcggttcctggaggagatcccggaacagcacctggactggcggcgcaag
gggccgatggccgcccccgccggacccacctccggcatcacgtcctcgctgtcctcctcg
cgctcccgttccggcccctcgggcttcgcgacccggcgcggcgcggagaagcccacggtc
gccctggcggtcggggaccgggtcacgcacgaccagttcggcctgggcacggtgacggcc
gtcgagggccacggcgaccaggcgaaggccacggtcgacttcggcgacgagcgcccgaag
aagctgctcctgcggtacgcgccggtcgagaagctgtag
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