Streptomyces californicus: I6J39_23380
Help
Entry
I6J39_23380 CDS
T07611
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
scal
Streptomyces californicus
Pathway
scal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
I6J39_23380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_23380
Enzymes [BR:
scal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
I6J39_23380
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
I6J39_23380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
HTH_32
Ubiq_cyt_C_chap
Motif
Other DBs
NCBI-ProteinID:
QRV29912
LinkDB
All DBs
Position
complement(5334776..5335987)
Genome browser
AA seq
403 aa
AA seq
DB search
MALNTSAEAPLPVGEVSRLIGGWIDRLGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDIS
VSVTCFRQVFDRIADVVSEGARVVVLAKPEWYAPRGQLSLRATDIRPVGIGELLVRLEQL
KKSLASEGLFALDRKKPLPFLPQLIGLVCGRASAAERDVLENARRRWPAVRFEVRNTAVQ
GVNAVAQVVQAVEELDALPEVDVIVVARGGGSVEDLLPFSDEQLVRTVAACRTPVVSAIG
HEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELDRVQQLRDRALRTVRGLLDREERGLA
HALGRPAMERPQRLVDEREAEVDALVGRSRRVLGHLLDRADSELAHTLARVVSLSPAATL
ERGYAVLQRPDGHVVRSPDEAGAPGEPLRARVSEGEFTVRVDG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaacacgtccgcggaagcgccgctgcccgtcggtgaggtctcccggctgatc
ggggggtggatcgaccggctcggcgctgtctgggtggaggggcagatcacccagctctcg
cggcggccgggggccggtgtcgtcttcctgacgctgcgggacccctcgcacgacatctcg
gtgagcgtgacctgtttccggcaggtcttcgaccggatcgccgacgtggtgagcgagggc
gcgcgggtcgtcgtgctcgccaagcccgagtggtacgcgccccgggggcagctctcgctg
cgggccaccgacatacggccggtcggcatcggcgagctgctggtgcggctggagcagttg
aagaagtcgctcgcctcggaggggctcttcgcgctggaccggaagaagccgctccccttc
ctgccgcagctcatcggcctggtctgcgggcgggcgtccgccgccgagcgcgacgtcctg
gagaacgcccgccgccgctggcccgccgtccgcttcgaggtccgcaacaccgccgtccag
ggggtgaacgcggtcgcccaggtcgtgcaggcggtcgaggagctggacgcgctgcccgag
gtcgacgtgatcgtggtcgcccggggcggcggcagcgtcgaggacctgctgccgttctcc
gacgagcagttggtgaggacggtggccgcgtgccgtacgccggtggtctccgcgatcggc
cacgagcccgactcgccgctgctggacctggtggccgacctgcgggcctccacgccgacg
gacgcggccaaaaaggtcgtccccgacgtgggcgaggagctggaccgggtgcagcagttg
cgggaccgggcgctgcggaccgtacgggggctgctggaccgggaggagcgggggctcgcg
cacgcgctgggccggcccgcgatggagcggccgcagcggctggtggacgagcgcgaggcc
gaggtcgacgcgctcgtcgggcgtagccgccgggtgctgggccatctgctggaccgcgcc
gattcggagctggcgcacacgctcgcccgggtcgtctcgctctcccccgccgccacgctg
gagcgcgggtacgcggtgctccagcggcccgacgggcacgtggtgcgctcccccgacgag
gccggggcgcccggtgaaccgctgcgggcgcgggtgtcggagggcgagttcaccgtacgg
gtggacgggtga
DBGET
integrated database retrieval system
